LOCUS       XM_041363529            3363 bp    mRNA    linear   PLN 15-SEP-2021
DEFINITION  Suillus fuscotomentosus NRDE-2, necessary for RNA
            interference-domain-containing protein (F5891DRAFT_1097551),
            partial mRNA.
ACCESSION   XM_041363529
VERSION     XM_041363529.1
DBLINK      BioProject: PRJNA727288
            BioSample: SAMN12811781
KEYWORDS    RefSeq.
SOURCE      Suillus fuscotomentosus
  ORGANISM  Suillus fuscotomentosus
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Agaricomycetidae; Boletales; Suillineae;
            Suillaceae; Suillus.
REFERENCE   1  (bases 1 to 3363)
  AUTHORS   Lofgren,L.A., Nguyen,N.H., Vilgalys,R., Ruytinx,J., Liao,H.L.,
            Branco,S., Kuo,A., LaButti,K., Lipzen,A., Andreopoulos,W.,
            Pangilinan,J., Riley,R., Hundley,H., Na,H., Barry,K.,
            Grigoriev,I.V., Stajich,J.E. and Kennedy,P.G.
  TITLE     Comparative genomics reveals dynamic genome evolution in host
            specialist ectomycorrhizal fungi
  JOURNAL   New Phytol (2020) In press
   PUBMED   33355923
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 3363)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-SEP-2021) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 3363)
  AUTHORS   Kuo,A., Lofgren,L.A., Vilgalys,R., Nguyen,N.H., Ruytinx,J.,
            Liao,H.-L., Branco,S., LaButti,K., Lipzen,A., Andreopoulos,W.,
            Pangilinan,J., Riley,R., Hundley,H., Na,H., Grigoriev,I., Barry,K.,
            Stajich,J.E. and Kennedy,P.G.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (22-APR-2020) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_024539513).
            
            ##Metadata-START##
            Organism Display Name :: Suillus fuscotomentosus FC203 v1.0
            GOLD Stamp ID         :: Gp0217367
            ##Metadata-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..3363
                     /organism="Suillus fuscotomentosus"
                     /mol_type="mRNA"
                     /strain="FC203"
                     /db_xref="taxon:1912939"
                     /chromosome="Unknown"
                     /geo_loc_name="USA: California"
                     /lat_lon="39.3202 N 121.377 W"
     gene            <1..3363
                     /locus_tag="F5891DRAFT_1097551"
                     /db_xref="GeneID:64657827"
     CDS             1..3252
                     /locus_tag="F5891DRAFT_1097551"
                     /codon_start=1
                     /product="NRDE-2, necessary for RNA
                     interference-domain-containing protein"
                     /protein_id="XP_041233803.1"
                     /db_xref="GeneID:64657827"
                     /db_xref="InterPro:IPR013633"
                     /db_xref="JGIDB:Suifus1_1097551"
                     /translation="

MSTPSFSSFPPSFASFPDLDPGPSRNTLDRTRNENSTDAREKDSMVKKDNSRRGSKKLADKSRKDKKHKTAKHDLEPVLPRQHGHTWKGVNIPDDGKIKAEEDRRLAESDTQESQWDSRPVFFSDRKGDQLNVTYGGIHAGNIPKYHIVNRGRSILGLDGDWTIYRGSKGIEINIGRRHKQPALTDLSVTTLLAAPPSRRIIGSGDSYKYEEVDGFLRLPSDHGYKAAENYRSVTRQQEHLDSDSQSSTPDDSSGDESGPILTSHQLSLKTLEQQLAADPSSVETWLSLVRHSLSNIPVTSKNATKARAEITLAILTRARASHPHNRSSRILFLNYLRAGEEVWHESKTKAEWEEALKLGGIEIWMEWLEWRIRTAAGGADTSVMDATRILSALGSSESCEIDKLRVVWRVAVAFQQAGYYERTTALFQAQAELTFEVPQPLYGLPLESQLESLEEFWESEAPRIGEPGAKGWGHWISCGRPENSSSPLEAIPQMDGDIQSKDPYVQWHYDESRADCTSRVPARSVDTRSHSDPYATVLLSDIKALLLPLRTKGAKNAFRLIWLSVLGLHIPSLAETLSQGSWDDRWSLTYLYSFSRLDSIFPATAGQRQLIADSHAGTLIGREREFSSSFGPIKEWSRDTLGPLEWVGQEKWRMWTAVDLQGIDQDFVRAVFKQLRCGSEDHEWGIYALAFEAALDIKSALKLSRSFLSTARDSLPHWASHARLERLRERVGDARKVYQTVLVASQHPPTQPFVGRLWWDWAEMEWLNGDRNAVLRVIQRSVNIEGAGGMMILRVKRTLDDMISCAHEQWKDREGWIKLRALIELLTSSSQDGALTIFDSHTSVNESSDSRESMMVASLILLYNHSVMLRSPTPPAVLRDRLQIAVNTYPNNSLVLGMFLEAEKGYGIWGRVRAQLGQSTADGGPREKNISRRIAEVWVAGWEKGRWQSEIERTRSGLTAAVESERTTGSAILWRVILEFEIRVEELQRAKKLLYRAVNECPLAKDLYMVAFGPLRSMFSARELDGFVDIMAERGIRMRKGVDEYVERMTSGDERGSDNEDLDGSEDEIEHEARQRRLLMPY"

     misc_feature    364..>477
                     /locus_tag="F5891DRAFT_1097551"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    814..1704
                     /locus_tag="F5891DRAFT_1097551"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:462472"
ORIGIN      

atgtccacaccctcattttcgtcatttccaccctcattcgcctcgttcccagaccttgaccctggtccgagtaggaataccctggaccggacgcgaaatgaaaactccacagacgctcgggagaaagatagtatggttaaaaaggacaacagccgacgtggcagcaagaagttggcagacaagtctcgaaaggacaaaaagcataagacggcgaagcacgacctcgagccggtgcttcccaggcaacacggacatacatggaagggagtaaatataccggatgatggaaaaatcaaggccgaggaggatagacgtcttgctgagagtgatactcaagaaagtcaatgggattctcgcccagtatttttctctgatcggaaaggtgaccaactaaatgttacctacggcggtattcacgctgggaatattcccaagtaccatattgtaaaccgtggtagaagtattcttggtcttgatggggactggactatctatcgcggaagcaagggtatagagataaacataggaaggaggcataagcaacccgccctgaccgacttgagcgtgacaacattgttggcagcacccccgtctcgacgcattattggatccggggatagttacaaatatgaagaagtggacggtttcttgcgactgccctccgaccatggttacaaagctgccgaaaactatcgttctgtaaccaggcagcaagaacaccttgattcagactctcagtcgtctactccagatgacagctcaggtgatgagtcaggacccattctcacatcacatcagttatctttgaagacactcgagcagcagttagctgccgatccatcttcagtcgaaacatggttgtcactcgtgagacactcgttgtccaacattcccgtcacctcgaaaaacgcgaccaaggctcgggcagagataacgcttgctattcttacccgtgctcgtgcttcccatccacacaaccggtcatctcgcattctattcttgaattacttaagggcaggagaggaagtttggcacgaaagtaaaaccaaggccgagtgggaggaagccctcaaacttggcggaattgaaatttggatggaatggcttgaatggcgcattcgtaccgctgccggtggagctgacacgtcagtcatggatgcgacgcgcatcttaagcgctctcggtagctctgaaagctgtgaaattgataaactacgagtcgtatggcgagttgcagtcgcattccaacaagcaggctactatgaacgtactacagccttattccaggcacaagcggaactaacattcgaggtgccccaaccattgtacggacttccccttgaatcgcaactggaatccctcgaagaattttgggagtccgaagcaccgcgcatcggggagcctggagcgaaaggttggggtcattggatctcatgcggtagacctgagaattctagttccccgttggaggcgattccccagatggacggtgatatccaatcgaaagatccgtatgtccaatggcattacgatgagtcgcgcgccgattgcacgtcgcgtgtgcccgcccgctccgttgacacaaggagccattctgacccatacgcgacagttctgctttcggatatcaaggcactgttattgcccctccgcacgaaaggtgccaagaatgcgttccgcctaatctggttatccgttctgggcttgcatattcctagcctcgcagaaacgctatcgcagggatcttgggatgatcgatggtcactcacttacctctattctttctcgcggttggactcaatttttcctgctactgcaggacagcggcagctgatcgctgactctcatgctggcacgctcataggcagagaacgagaattttctagttcattcggtccgatcaaagagtggagtcgcgataccctcggaccgttggagtgggtaggccaagagaagtggcgcatgtggactgccgtagatctgcaagggatcgaccaggatttcgtacgagctgtattcaagcagctcagatgcggtagtgaggaccatgagtggggcatttatgcattagcatttgaggcagctcttgatatcaaaagtgctctgaagctctcgcggtcgtttttatcgacagcacgagattctctaccgcactgggcaagccacgcacgtcttgagcgcttgcgcgagcgggtgggtgatgcccgcaaggtctatcaaacggtacttgtagcctctcagcacccacccacccagcctttcgttggtcggttatggtgggattgggctgaaatggaatggctcaatggtgaccggaatgcggtactacgtgttatccagcgctcagtcaacatcgagggtgcaggtggtatgatgattcttcgtgtaaaacgcactctcgatgatatgattagctgcgctcacgagcagtggaaggaccgggagggttggatcaaactgcgagccttaatcgagctgcttacctcctcatctcaagacggagcactcacgatatttgactctcacacgagcgttaatgagagctctgattcaagagagagcatgatggtagcatctcttatactattgtacaatcattcggtcatgctacgaagtcctactccgccagctgtcctgagggatcgattacagattgctgtcaacacttacccgaacaatagcctggtgttgggaatgtttctagaggctgagaaggggtatggtatctggggtcgtgtacgggcacaacttggacaaagcacggctgatggaggcccaagggaaaagaacatttcacggcgcatcgcagaagtgtgggttgctgggtgggagaaagggcgatggcagagtgagatcgaacggacgaggagcggacttactgcggcggtggagagtgagaggacgacgggaagcgctattttatggcgcgtcattttggaatttgagattcgggttgaggaattgcaaagggcgaagaaactgctttacagagcagtgaatgaatgtccgcttgccaaagatttatacatggtggcttttgggccactgcgttctatgtttagtgctcgcgagcttgatgggttcgtggacattatggcggaaaggggtattcggatgaggaaaggtgttgatgaatacgttgaaaggatgactagcggagatgaacgcggttctgataacgaagatctggatggttccgaggatgagatcgaacacgaggcgaggcagaggcggctactaatgccttactagctaattctagtgtactattcccggtgtgcaaataaaccaagaccttgatattgttttggtttatttgtgacgaggacaccacattgcatgacaaatagttacaaacattct

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