LOCUS       XM_040261739           14146 bp    mRNA    linear   MAM 20-MAR-2021
DEFINITION  PREDICTED: Oryx dammah argonaute RISC catalytic component 2 (AGO2),
            mRNA.
ACCESSION   XM_040261739
VERSION     XM_040261739.1
DBLINK      BioProject: PRJNA694191
KEYWORDS    RefSeq.
SOURCE      Oryx dammah (scimitar-horned oryx)
  ORGANISM  Oryx dammah
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Hippotraginae; Oryx.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024070203.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryx dammah Annotation Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14146
                     /organism="Oryx dammah"
                     /mol_type="mRNA"
                     /isolate="SB20612"
                     /db_xref="taxon:59534"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="liver"
                     /dev_stage="adult"
                     /country="USA: Front Royal, Virginia"
     gene            1..14146
                     /gene="AGO2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 714 long SRA reads, 30 Proteins,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 16 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120878856"
     CDS             129..2570
                     /gene="AGO2"
                     /codon_start=1
                     /product="protein argonaute-2"
                     /protein_id="XP_040117673.1"
                     /db_xref="GeneID:120878856"
                     /translation="

MDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKDRIFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQPPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSGQSNGRDHQALAKAVQVHQDTLRTMYFA"

     misc_feature    264..488
                     /gene="AGO2"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    516..668
                     /gene="AGO2"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    669..1031
                     /gene="AGO2"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(825..827,870..872,912..914,924..926,978..980,
                     999..1001,1005..1007)
                     /gene="AGO2"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1164..2441
                     /gene="AGO2"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1575..1577,1587..1589,1623..1634,1641..1643,
                     1665..1667,1674..1676,1686..1688,1698..1700)
                     /gene="AGO2"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1779..1781,1785..1787,1995..1997,2409..2411)
                     /gene="AGO2"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

gtgttccagcgctcacgcctcctgctccgccaccgccacccatccaaggatatgccttcaagcctccacccagacccgacttcgggacctccgggagaacaatcaagttacaggccaacttctttgaaatggacattccaaaaattgacatctatcactatgagttggatatcaagccagagaaatgcccaaggagagttaacagggaaatagtggaacatatggttcagcactttaaaacacagatctttggggatcggaaaccagtgtttgacggaaggaagaatctctacacagcgatgccccttccgatcgggagggataaggtggagctggaggtcacgctgccgggagaagggaaggaccgcatcttcaaggtgtccatcaagtgggtgtcctgcgtgagcttacaggcgttacacgatgcactttcggggcggctgcccagcgtcccctttgagacgatccaggccctggacgtggtcatgaggcatctgccatccatgaggtacacccccgtgggccgctccttcttcacggcatccgagggctgctccaacccgctgggtgggggccgagaggtgtggtttggcttccatcagtccgtccggccttctctctggaagatgatgctgaatatcgatgtctcggcaacagcgttctataaggcacagccagtcattgagtttgtttgtgaagtcttggattttaaaagtattgaagaacaacagaaacctctgacagattcccaaagggtcaagtttaccaaagaaatcaaaggtctgaaggtggagataacgcactgcgggcagatgaagaggaagtaccgtgtctgcaacgtgacccggaggccggccagccaccagacgttcccgctgcagcaggagagcgggcagacggtggagtgcacggtggcccagtacttcaaggacaggcacaagctggttctgcgctacccccacctcccgtgtttacaagtcggacaggagcagaaacacacctaccttcccctggaggtctgtaacatagtggcgggacagagatgtataaaaaagctgaccgacaatcagacctcaaccatgatcagagcgacggccaggtcagcccccgatcggcaggaagagattagcaagctgatgagaagtgccagtttcaatacagatccttacgttcgtgaatttggaatcatggtaaaagatgagatgacagacgtgaccggacgggtcctccagccgccctccatcctctacgggggcaggaataaggcgattgccaccccagtccagggcgtgtgggacatgaggaacaagcagttccacacgggcattgagatcaaggtgtgggccatcgcctgcttcgccccccagcgccagtgcacggaggtgcacctcaagtccttcacggagcagctcagaaagatctcgagagacgcaggcatgcccatccagggccagccgtgcttctgtaaatatgcccagggggcagacagcgtggagcccatgttccggcacttgaagaacacgtatgctggcctgcagctggtggtggtcatcctgccggggaagacccccgtttacgccgaggtcaagcgtgtgggagacacggtgctgggcatggccacacagtgtgtgcagatgaagaacgtgcagaggaccacgccacagaccctgtccaacctctgtctgaaaatcaacgtcaaactgggcggcgtgaacaacatcctgctgccgcaggggaggcctccagtgttccagcagcccgtcatctttctgggggcagatgtcactcacccccccgccggggatgggaagaagccgtccattgccgccgtcgtgggcagcatggacgcccacccgaaccgctactgtgccaccgtgcgcgtgcagcagcaccggcaggagatcatccaggacctggcggccatggtgcgtgagctgctcatccagttctacaagtccacgcgcttcaagcccacccgcatcatcttctaccgcgacggcgtctccgaggggcagttccagcaggttctgcaccacgagttactggccatccgtgaggcgtgcattaagctagagaaggactaccagccaggcatcacgttcatcgtggtccagaagagacaccacacgcggctcttctgcactgacaagaacgagcgggttgggaaaagcggaaacattccagcaggcacaaccgtggacacgaaaatcacccacccgactgagtttgacttctacctgtgtagtcatgctggcatccagggaacaagcaggccctcgcactaccacgtgctttgggatgacaatcgcttctcttccgatgagctgcaaatcctcacctaccagctgtgtcacacctacgtgcgctgcacacgctccgtgtccatcccggcgccagcatactatgctcacctggtggccttccgtgccaggtaccacctggtggacaaagaacacgacagtgctgaaggaagccatacctccgggcagagtaacggacgagaccatcaggcgttggcaaaggcagtgcaggtccaccaggacacgctgcgcaccatgtactttgcttgacatgtttcagtgtttacgactgtgtaccgagtgggattcacacgagaccagctacactcagaccaacaaatgcccagcccttccgtgacagccagcatcgacatgacacgtcatccattttagtagattctccattttccagaatgccttccgtcccagatttcaaacttggattttgaactgcagacctgtatgagacccccattgtcgtaggaaatatggtttgccaaaatcttataagctgcttattgaaatagagtcccgtgtttcctaaaaatctcctaaaaccagtctatgaactcagggctttaaaacatttttaatttatttggtcattcaatttacttatttttaacacatgattctctatgaatttgatgggctcaaactagctgtgaacattctatgagagtgaaagcaacacaaaacacgttgtggttttaaagccttgaacattctgacgttgtcactaaagtttatttcagagtgatgccggcgtgctcctgacctggctccgaccagctgtccgggacccaagggcaggggccaggcgagacgcccggggtctctcgttctgccactggccgccttccgctcagctcggaggagggcgcggtggcagaagatgggccgtgtgtgttcattaacatttacaggtccagagagattggcagacaagtgccattttaataaaaaattatttaagaaaagaaagacaatatgccgacaggctaatcataagatttgtcctataggactgtgacatttattttccaaagtttctaaagaatacgggtctgtggtgataaatacagtacaatcctttttcactgttatgtctttaacgtaagagaaaaaaatatatatctggtttgcagtattaatgtggtagatagatgctgtttttcattttattgactacggggtgcttcttgtgatctgttcagcatatcaagagagttctggagcctggaccaccccttgtggttctcagtgccgaagtgcaggagtatgcggttgactccgtgtggccgcggcccgcccccgcatgctgagtgcacagcctggaccctccaggggcctgggtgtgctcctggcagtctctcccgcttccctgccccctcaccctcgtgtgtcgctcagccgattaagcacaaatggaatgtatgtgtccttccactcccaggaacgagtccgtgtagcagcgtgcacatctctgcgtgtggtgtgttagccaagcgtcataggatctatgcactgaaactagggaaggctgttggtggtgggcctctgccagacaagaggccagtggtctgcgaaggagcgctgccctcagcgggtggctgatggccgggtgtcgggagaggcagcccctctgctaggatttgcatcctggccccagacgtgggttcgccagtcgagaaaccgtcgcagtgagagtggtgctgtggacagctcgacgagctccgctgtgctaagtgggctttctgtccttgtaggcagttgttacagaaatcaagtccatggtcagtacagagagtccaggaaggagacgagccttcccctagcgctgcgtcacgcctgtaggtttcctcaggccctgccgatggccctgcccatccaggcctgacactgacctcttgcgctggggtgtctcctgctggggtgagcgcctgcctccatcttgtacgggggctctgaggggccaggagttggggggacacgctgtaggggactcttggcctggattttgggggcagcgacaaagggatgaatattatttgtgtcagtatatactcagagtggtgtgtgtgtgcgtgcacgcacacgtgtgtgcacatgtgggtgtcttattaatggcattagtctcttcttgctgtatcttttttttttttctttttaaatgacagaagcctctgcttaaagaattgttgcaattccctgtcattttattatcaagtggcactttctcctattccgagggacaccagtaaagtacactcttggcttaattactgggagcattcaagcaaaggagggaatcttttcactaaaatacttttaaagtcttcagtgaggttagttttcagccatgttcagtatcatgtagaactgtgtgtctccaaggtatgtatttaccacttgcaacaggatctcggggggtcgggatggcggtggtaaaaacaactcagtctcccgctctcgctgccgagtcagagcctccggggcaggtggctgggcattgagtttgtcaccatcagctgggggcttgggctgcctggagtctgagaactgatctagaaccttctggagaggaagctcccccaggcaccccttctggcagtgcaggaagacgtcttctgagctaatggtctggggaagactacaggctggcagaaaataagacctaaattctttaaaaaaaaaaaa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