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2024-04-20 14:16:45, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_040109658            1828 bp    mRNA    linear   INV 18-MAR-2021
DEFINITION  PREDICTED: Bactrocera tryoni mitochondrial pyruvate carrier 2-like
            (LOC120777994), transcript variant X2, mRNA.
ACCESSION   XM_040109658
VERSION     XM_040109658.1
DBLINK      BioProject: PRJNA695304
KEYWORDS    RefSeq.
SOURCE      Bactrocera tryoni
  ORGANISM  Bactrocera tryoni
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_052499.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Bactrocera tryoni Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Bactrocera tryoni"
                     /mol_type="mRNA"
                     /isolate="S06"
                     /isolation_source="lab stock"
                     /db_xref="taxon:59916"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="Whole body"
                     /dev_stage="adult"
                     /country="Australia: Sydney"
                     /collection_date="2006"
     gene            1..1828
                     /gene="LOC120777994"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 18 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 12 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:120777994"
     CDS             198..659
                     /gene="LOC120777994"
                     /codon_start=1
                     /product="mitochondrial pyruvate carrier 2-like"
                     /protein_id="XP_039965592.1"
                     /db_xref="GeneID:120777994"
                     /translation="
MASSAPPAAAPPPPPPPSATTAGKGFPNKIYNALIGSVDKHVPEKLRPLWQHPAGPKTVFFWAPLFKWSLVIAGLSDLARPAETLSVPQCAALAATGIIWSRYSLVIIPKNYSLFAVNLFVGLTQVVQLGRAYNYQMEQNKLAGEQPAKKNEL"
     misc_feature    330..656
                     /gene="LOC120777994"
                     /note="Uncharacterized protein family (UPF0041); Region:
                     MPC; pfam03650"
                     /db_xref="CDD:427425"
ORIGIN      
tggatgttgtgctggaatttcttcactatctagcaaacggtgaggaagtcaacaccagtaattgttcaagtaaggtaccttgtataccttgcctttagaataaagttagaaaattgtaaatacgagaaactagtacaaaatatctaatctcaaacgaaacaaaaatctgaaataagtgcttagaaaacaacaataaaatggcttcctcagcacctccagcagcagcaccaccaccaccacctccgccatcagccactaccgctggcaaaggatttcccaacaaaatttacaatgctcttattggctcagtggacaaacatgtgcccgaaaagttgcgaccattgtggcagcatccagcaggaccaaaaactgttttcttctgggcaccacttttcaaatggtctcttgtcatagctggtctcagcgacttggcgcgtccggctgaaactctttcggtgccccagtgtgcagcactcgccgccaccggtatcatttggtcacgttactccttggttatcattcccaaaaactacagtctgttcgccgtcaatttatttgtcggtttgacacaagtcgttcaactgggccgcgcatacaattaccaaatggaacagaacaaactggctggtgaacaacctgcgaagaagaacgaattgtaaatggctttaatttcgatttgtatataatattcaaatgtttgtatatacacatgtatataatgttaatgagacgcatgctacctacattaattatgcgatcacttttcaatattttctgttcttacatactatttatgaatatgtatacaatccactttacatacatatatgagtgataaaaaggtaattacggccaaaaaacacatcaggcggtggcggtaataaaataaaaataaatagagcaagcgcaaagctcttacatatatatgtatattatacatttgtatgtatgtatgtatatttgtatacccacgtgcataagcaagttactaattgcacttgaatgcaaaatgtcaatgtcaatgccgcaacattcacttgactccactcattcacaaaaatatacacacatacttacatatgtaaatgacttagccaaacaacaaaaccattggccagtaaaagtgctcaatatgccgaagcagtcatttattattatataatagtactacaaaaactggtgatataattaagtagtgaattgtaaattaaataatattatcatgttcgattatactgaagctgaattaattttgaatttaaactataactaagttaagaaagttaatcaaaaagaccatcacaaaacagcacaaaatatgcaaataaaaaggtataaaacacaatttgtacaaaagcttcccaatgaaagtgaaattgttttttctttcttttaatcttttgttaataacatcaaactattgcatattaaatagcaatttttttctcgtttaatcaatttgtcaatgcagaccttaacacacatgccaaagagtttaaagtttgtgtttccatcaataataaagaactggtttgagcaaaagaaaaaacgaaaaagatacatatgacatttacatactaatatttatgtacatatgtacataagtcgtaagaggctgcacaaattacatagcatagcaaagtacccaattagcatctaacatggaaacagccatatgtagataaatgtgttaattatatgtacatacatatgtattttaggcaatgagaacttttgtttgtagaattacgagtaaaagttaaaaaaaaaactttttgcatgtgtactttaagtctcaataaagaaacgaacgaaacgagtttacgtg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]