LOCUS       XM_039574741             717 bp    mRNA    linear   INV 19-DEC-2022
DEFINITION  PREDICTED: Culex pipiens pallens E3 ubiquitin-protein ligase
            RNF180-like (LOC120413791), mRNA.
ACCESSION   XM_039574741
VERSION     XM_039574741.2
DBLINK      BioProject: PRJNA702155
KEYWORDS    RefSeq.
SOURCE      Culex pipiens pallens (northern house mosquito)
  ORGANISM  Culex pipiens pallens
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Nematocera;
            Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_068939) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 19, 2022 this sequence version replaced XM_039574741.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_016801865.2-RS_2022_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Culex pipiens pallens"
                     /mol_type="mRNA"
                     /isolate="TS"
                     /host="mouse"
                     /sub_species="pallens"
                     /db_xref="taxon:42434"
                     /chromosome="3"
                     /sex="female"
                     /tissue_type="whole body"
                     /dev_stage="adults"
                     /country="China: Taian"
                     /collection_date="2019-12-20"
     gene            1..717
                     /gene="LOC120413791"
                     /note="E3 ubiquitin-protein ligase RNF180-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:120413791"
     CDS             157..510
                     /gene="LOC120413791"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF180-like"
                     /protein_id="XP_039430675.1"
                     /db_xref="GeneID:120413791"
                     /translation="

MLIKCRKCSNPLAAIDDAHVLAVHSRREFAADSLPACPTERDNAEVFLHEDHLPGWMNAEIEQTQWTRGKLKCTKCGQKVGSFDFVSGVRCKCPVGGSVLPAVHLVRSKVDLRKSVG"

     polyA_site      717
                     /gene="LOC120413791"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

cgtaaacaaacaaacgtggttttcagtgtgccaaagcaaaggtagctttgttcgttcggatttcgacggcctaatcagctggctctgggcgctgcagacgacggttatcacactcacgtgggagatcgcaccggccggcgtaacgattccccaacaatgctgatcaagtgccgcaagtgctcgaacccgctcgccgccatcgacgacgcccacgtgctggcggtccattcgaggcgcgagttcgccgcggattcgctgccggcgtgccccaccgagcgggacaatgcggaagttttcctgcacgaggaccacctgccgggctggatgaacgcggaaatcgagcagacccagtggacgcggggaaagctcaagtgcaccaagtgcggccagaaggtcggctcgttcgactttgtttcgggcgtgcggtgcaagtgccccgtgggtgggagtgtccttccggcggtgcatttggtgcggagtaaggtcgatttgcggaagagtgtcggatagaaagggagaaggagagacgaggtttgtttttttttcgcttttttttaaataatttatttcaaactcttatgcataaaagatacaaaatatgttttttttgttgttcaaattacgagtaaccttaaaatttactagaaatatgtacgcgtttactgttttaagagacgaattaaaaatgaaacatgtataagtgtacgtgtgtaaaga

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