LOCUS       XM_039511514            6423 bp    mRNA    linear   VRT 13-FEB-2021
DEFINITION  PREDICTED: Mauremys reevesii argonaute RISC component 4 (AGO4),
            transcript variant X3, mRNA.
ACCESSION   XM_039511514
VERSION     XM_039511514.1
DBLINK      BioProject: PRJNA699301
KEYWORDS    RefSeq.
SOURCE      Mauremys reevesii (Reeves's turtle)
  ORGANISM  Mauremys reevesii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
            Testudinoidea; Geoemydidae; Geoemydinae; Mauremys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_052645.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Mauremys reevesii Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6423
                     /organism="Mauremys reevesii"
                     /mol_type="mRNA"
                     /isolate="NIE-2019"
                     /db_xref="taxon:260615"
                     /sex="female"
                     /tissue_type="muscle"
                     /country="China: Wuhu"
                     /linkage_group="23"
     gene            1..6423
                     /gene="AGO4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 39 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:120389172"
     CDS             22..2607
                     /gene="AGO4"
                     /codon_start=1
                     /product="protein argonaute-4 isoform X3"
                     /protein_id="XP_039367448.1"
                     /db_xref="GeneID:120389172"
                     /translation="

MEALGPGPPASLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSIQWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTGRVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKLTYVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQETSQELLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCADKTERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTQHTMYFA"

     misc_feature    97..486
                     /gene="AGO4"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    517..669
                     /gene="AGO4"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    670..1032
                     /gene="AGO4"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(826..828,871..873,913..915,925..927,979..981,
                     1000..1002,1006..1008)
                     /gene="AGO4"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1171..2478
                     /gene="AGO4"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1582..1584,1594..1596,1630..1641,1648..1650,
                     1672..1674,1681..1683,1693..1695,1705..1707)
                     /gene="AGO4"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1786..1788,1792..1794,2032..2034,2446..2448)
                     /gene="AGO4"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

gaggccgccgccgccgccgccatggaggcgctgggacccgggcccccagccagcctcttccagccgccccgccgccccggcctgggaactgttgggaaacccatccgtctcttagccaatcattttcaggtgcagatccctaaaattgatgtttatcactatgatgtagatatcaaaccagaaaagcggccccgaagagtgaacagggaggtggtagatactatggtgagacacttcaagatgcagatatttggtgatcggcagccaggatatgatggcaaaaggaacatgtacactgcacacccattgcctattgggagagatagggtggatatggaggtgacactcccaggtgaggggaaggaccagacgtttaaagtgtctattcagtgggtgtcagtggtcagccttcagctgcttctggaagctctggcagggcatttaaatgaagttcctgaagactctgtacaggcacttgatgtaatcacacggcaccttccctccatgagatacacccctgtgggccgttccttcttctctcctcctgaaggttactaccaccctctgggaggaggcagagaggtttggtttggattccatcagtcggttcggcctgccatgtggaacatgatgctcaatattgatgtatcggcgactgctttctatcgtgcccagcctatcattgagttcatgtgtgaggtcctggacattcagaacatcaatgaacagaccaagcctcttacagactcccagcgtgttaagtttaccaaagaaatccgaggtctaaaagtagaggttacccactgtggccagatgaagagaaaatacagagtttgcaatgttaccaggcgaccagcgagccatcagacgttccctctgcagctggaaaatggacaggctatggagtgtacagtagctcagtattttaagcaaaagtacagtctgcagctgaagtatcctcaccttccgtgtctccaagtgggacaggaacagaaacacacttatttaccacttgaggtgtgtaacattgtggcaggccaacgatgtatcaagaagctaacagacaatcagacttcaactatgataaaggcaactgcaaggtcggcaccagacaggcaggaagaaatcagcagacttgtgaagagcaacagtatggtaggtggaccggatccgtatctgaaggagtttggcattgtggtccataatgaaatgacagagttaacaggcagagtattgccagcgccgatgctgcagtatggaggccggaacaagactgtagctacaccaaaccagggtgtttgggacatgagagggaaacagttctacgctggcatcgagattaaagtttgggctgttgcctgctttgcacctcaaaaacagtgcagagaagacttgctcaagagtttcacagaccagctgcgcaagatctcaaaggatgcggggatgccaatccaaggccagccatgtttctgtaaatacgcacaaggcgcagacagcgtggagccgatgttcaaacacttgaagttgacctacgttggtctgcagctcatagtagtgatcctgcctggaaagactcctgtgtatgctgaggttaagcgagttggtgacactctcttaggaatggccacgcagtgtgttcaggtgaagaatgtggtaaaaacctcaccccaaactctgtccaatctttgtctgaagataaatgcaaagcttggagggatcaacaatgtgcttgtacctcatcaaaggccctctgtgttccagcaaccagtgatcttcctgggagcagatgtcactcaccctcccgctggggatggaaagaagccatccattgctgctgtggtaggcagtatggatggccaccctagtcgctactgtgctactgtgcgtgtgcagacctcccgtcaggagacttcccaggagttactgtatagtcaggaagtgatccaggacctgactaacatggtacgagagctgctgatccagttctacaaatctactcgcttcaagcccacacggatcatttactacagaggaggagtttcagagggacagatgaaacaggtagcttggccagaattgattgcaatccggaaggcctgtatcagtttggaagaagattatagaccaggaataacctacattgttgtgcagaaaaggcatcacactagactcttctgtgctgacaaaactgaaagggtgggtaaaagtggtaatgtaccagcaggcactaccgtggacagcaccatcacacatccctctgaatttgacttttacctctgtagccatgcaggaattcagggtaccagccgcccatctcactatcaggtcttgtgggatgacaactgtttcaccgcagatgaattgcagctgctaacctaccagctgtgtcacacgtatgtccgctgtacaagatccgtctccattccagctcctgcgtactatgccaggctggtagcatttagggcaagataccatcttgtagacaaggatcatgatagtgctgaaggcagccacgtttcaggacagagcaatggtcgggatccccaggctctggcaaaggcagtgcaaatccaccatgatacccagcatacaatgtattttgcctgagtccatctgggaagacgaggcagaaccggcaacccacgcagtcctgaaatgttttgaacgcctactgcttatagctagggctcagtttatttcagactgcgtactaccagcagctctgaacagtcgcactgaatctacacttcacagcaatgtctgatgcaccaacacaattgagccatttgttttgttgttttaagtaatagaaattcatgaactgtcttttctgatgcattggactgaatttttacctcaaagcgcaaaaggccgatcatcctgaaatttttaaaagacttggcatgaaagatttttattgaatattttgctagctatggtttttaagttatctcctcatcccactagtttatcaagatgagtaattccctttcttcatgcactgcttagtaagtatgcatattatggcaaaccattttactccaattcaatgtaaccattctattgtgtggggccatagattttttttttatggagattttagatttcactactgtaaatgccttttaacaaacattaactttcacaggtattgcagttttttgtcagttttactagttctctttttaatctctgcagacttgggctgcaaagcaattgcactatactgcggattcagctaggtggttcttgttctgtgaatgtgtaacataaccagatagtgatgcctggcagcaggttttaattatgatggttacaaataatactgccatgatatggtaacaagtactgaaccatttccccttctaaaaatgataaaatatttaaaaaaaaattagcttttagatatttttcaaacttttacaaaagtgcccactttatgctgctgtgtggtttgataaatctaggtgattttaaaacttttctcatagaaggtttaactttggcaataaattttttttaagcccccctgacagtgtaaaattctagctgaggattgtgcacgagtttaaccaaccttcttgtgtcgttttctgaacacacagtttggcagtttctgaaactaatcagaaaagatgcacttccatgggtttttttaataattatttttaactgttttatattcactggtgtcctgtctaccactttttttataagcttggaaattgggtgttatatataggaaaggcttgccatctgtacagttctaagtgtgttgtgtgacagtagcgacctgaagactggtaccagcattttaatcttcttttttttccccctggaaatctaggttgctcacacaattgcattcaacagcatgtttaaaaagtgtaaatcaaatatattctgtcccagactagaaattagttgtttttatttgcttggcttttttcagctaaaatgtataaaaaggaagaagggctctgcttcacttaatacttttggaactcacaaacatagtacattgagaatagatttcttttagtgttaacgtgagttaacacagactaaaatcttattccgagattcaacatagctaacattacaccactgcagaagctaagagaagtttgaaaagtcaccagctattgcactgtggtctctgccattggtgtggggtttgctgctaagtattgtgttgttcccgagcttggaaaccagccctctcgaaagctcagcaatatgaaatgctgttttttccttcagtcttctaaataagcttgtacataaaataaagtttacatttttaaatgctgtctttcagttgtacctaagtaagctgaagtttgtcttcaagacagttttataacctactttcagagtagtatgccccattaaaattagtttaaactttttctgttggaaaatgggactgaagcaagctctgctcctggtgtgtagtgtggacaggtttagataagattctttttaatttgttaagctttttttaaagaatacctcacttggataataatcaggacatgtgggtgggagactgactgctgcttcagctagatggctgcttttcttaatacttgttcagggagaatacaaaaaacccttttagaatgaactttgacccaatctatggtgaattttggcaccttgaagagaaattgagcaccctttagcttataggatcaaagatcactgtgggttcatgcactaggcaaaaatgtgactgattagtcaagggtggataagactgagatttaatttttaccaccagatagatagatgtccagtgccaagcactcctagttcagattgaatgaaatgagagcctctcatctgcttgcctgcaattagcctgaatatttaatctcaaactgtacagattattagacctcagctagctctgggaagcatggcaagaactttctaactcaatcttgtgttagaacatcataggactaaaatactggtaagggtgcagtgttgtcactttgagaggtagagagaaccgaagagcattttagatttagaattattgtcattgaagggtgtgtctttcgggaggttataactgcaagatcaaagttgcagcaatattgtatacagttctgaaagctgagtgatgaggtgcagcttgatgatctgaattaccccttgggactgactgaatcgttatgcatgtgtcaatcaatgggaagatgtgcattctgtagctgtagttcttagggtgtttggttttttaataaataaagcctgttggccactgtttagctatgtggtgtggaagattttaaatgtagcaaagtttaatgaattgggggaagggatagttgacagtaaagaagagcagaaaccccacttttgaaccagttctgctttctttgtaaacagttggattctgaacaagctctggaacgaaccagttggcctgtctcagacattcagacaggcccaacttatttattcttactgtaagcactacagtttagtgtagtgcctgtggctgcatccaaagggcataaaaggttgtgacagacaggcaaacatgcttcttaggcctggtctacactagaaaatttggtcagcttcactgcatcactcagggatgtgaaaaatctacacccctgtgggatgtagttaagctgacctgtcaacagcgctaggtggacgccagcatagggagtgtccatacttaagtgctgtagcgtttcaagtgtacaccagcccgcacagtacgtatcttgttccagactaattttagagcttatttacctatatcaaaagtcttgcccttcatatgggcaatggcatcctcttgttcacagagcgtttaacatttccctcccccccccccccaactacctttgtggatgtgctgtaggagttttcttgctcaatagcaaggcagtagctctactttcattttaagaaagcagagtttggagggcattgtatcaatactgtttcaactgcaaggttttttccttgtgaaatttgaggaaagatcttgtaatatcacagattttcttataccttgctattgacattttcatgatatttctatgtctagaggctgaaacttcaatgtaaaatgtttgcatttgttcattttgacttatgatgtaatttttgtttctatattgttagacttgtaatgtttaaaattgtattttattaaattggactggatgtatgtctatagcaatacgaggtactctttctaaactgttatggatgggttagcagccccatgttgcgataagatgctggtcgtgtacaatttgcaatgtattttttttagcctgcagggatattttgtgttcatgtgtccaaaaaaataaaaaattggcattcttgtgccaaatgttttgtttttttccttgttggtgtctaataaaaatgcaatgtaca

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