LOCUS       XM_038168559            1518 bp    mRNA    linear   VRT 10-MAR-2025
DEFINITION  PREDICTED: Anas platyrhynchos homeobox B8 (HOXB8), transcript
            variant X3, mRNA.
ACCESSION   XM_038168559
VERSION     XM_038168559.2
DBLINK      BioProject: PRJNA1232051
KEYWORDS    RefSeq.
SOURCE      Anas platyrhynchos (mallard)
  ORGANISM  Anas platyrhynchos
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes;
            Anatidae; Anatinae; Anas.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092614) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Mar 10, 2025 this sequence version replaced XM_038168559.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_047663525.1-RS_2025_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/07/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Anas platyrhynchos"
                     /mol_type="mRNA"
                     /isolate="ZD024472"
                     /db_xref="taxon:8839"
                     /chromosome="28"
                     /sex="female"
                     /tissue_type="blood"
                     /geo_loc_name="China: Beijing"
                     /collection_date="2024-04-30"
                     /breed="Pekin duck"
     gene            1..1518
                     /gene="HOXB8"
                     /note="homeobox B8; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:101797800"
     CDS             47..649
                     /gene="HOXB8"
                     /codon_start=1
                     /product="homeobox protein Hox-B8 isoform X3"
                     /protein_id="XP_038024487.1"
                     /db_xref="GeneID:101797800"
                     /translation="

MPDGAGFSSDRSAGGFSEPPVRDWFSFISNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK"

     misc_feature    356..526
                     /gene="HOXB8"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     polyA_site      1518
                     /gene="HOXB8"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tgtaacaaatatagaccctgattgtttacaaacgaggtcttatgtcatgccggacggagctggtttctcatctgacagatccgctggaggtttctctgaaccgcccgtgagggactggttttcctttatctctaatccctgcgccgtggcgtgccatggggaccccagcaacttctatggctacgaccccttgcaaaggcagagcctcttcagcgcccaggagtcggacttggtgcagtacacggactgcaagcttgctgccagcggccttggagaggaggcggagagctcggagcagagcccttctccgacccagcttttcccctggatgcgaccgcaagcagccgctggacggaggagggggaggcaaacctacagccgctaccagacgctggaactggagaaggaatttctatttaatccctacctgacccgcaaacggaggatcgaggtctcgcatgccctgggattgacagaaaggcaggtcaaaatctggttccagaacaggaggatgaaatggaaaaaggaaaacaacaaagacaagtttcccagcagcaaatgtgagcaggaagaactggaaaaacagaaaatggaaagagcccaggaggtggacgaggaaggggaagcacagaaggtggacaagaaataaaaggatttttaaggactgaaaggcaagcgctgctggggtggaagagcccctaagccccacattaatggtagttaatgtaagggaggggtgggaaacaacaatgcatagaaaagagaaagaaaaaaaaaaaaaaaaaaaacattttattgctgtaaaacaatatagctgtaagcaccactttcctgattatcctttgaaacaatgaacagtatgcaaaagtggtctggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaatttttttctctctctctctctgtctttctgtctctctcttctttcttggggggtgggttggttaacatagctttcaatgctatagaagttatgtggaattacatttgtgcacttttttaaaaatttccactttttttgttgtggtttatctgtatgtactggaggtagcgattgacacaaacatcccaacaacatgaaactgcctatttatgctacagttatctctctctttctctctttactttccttacttctgttcttttgttcctttcattttgttttgttttgttttgttttcgatttttgaatgtctcttaaaaaaaaaaaaaaaaaggagaaaaaaaaagcataaaaaagcgttttcctctcctttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaattactttattgggggaactaatgatatattttgttgttctttcatcactttgttctattgtctaaacctggaagcagcggaagaaagttacaataaagtttacaagcgagaa

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