LOCUS       XM_037031089            7101 bp    mRNA    linear   MAM 14-JUN-2021
DEFINITION  PREDICTED: Sturnira hondurensis NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), mRNA.
ACCESSION   XM_037031089
VERSION     XM_037031089.1
DBLINK      BioProject: PRJNA673222
KEYWORDS    RefSeq.
SOURCE      Sturnira hondurensis
  ORGANISM  Sturnira hondurensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera;
            Phyllostomidae; Stenodermatinae; Sturnira.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_023528387.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Updated annotation
            Annotation Name             :: Sturnira hondurensis Updated
                                           Annotation Release 100.20210611
            Annotation Version          :: 100.20210611
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; propagated
                                           RefSeq model
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7101
                     /organism="Sturnira hondurensis"
                     /mol_type="mRNA"
                     /isolate="20B"
                     /db_xref="taxon:192404"
                     /chromosome="Unknown"
                     /tissue_type="liver"
                     /dev_stage="adult"
                     /ecotype="Veracruz"
     gene            1..7101
                     /gene="NRDE2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 26 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:118976568"
     CDS             101..3604
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_036886984.1"
                     /db_xref="GeneID:118976568"
                     /translation="

MALFPAFAGVSEAPDSGSSRKELDWLSNPSFCVGTITTPSQRTEEATALVSEGSPLTRSPVKSDPSDDSDANRKLRHSGRKKKREKKRKRKHQHHEKTRRRHGQPGGSASASASDAGSDRDGSSRGSRDGKRESEKPSQEHSAAAHIGRRCVWLEDLQALTEETFRTDTKPDPANWEYKSLYRGDIARYKRKGDSCLGINPKKQRISWEGASAAKKHSHRRVERYFTKKNVGLMNADGVAVGSKTGPASSEPVSFIPVKGADDVAPPVTTWLNPLGIYDQSTTQWLQGQGPSEQESKQPDPEPDREDALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVMKSPGLYAIEEGGQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLQLCAEFWEPPTLLKEWQKLIFLHPNNTALWQKYLLFCQSQFSTFSVSKIHSLYGKCLSTLSAVKDGSILSHPELPGTEEAMFALFLQQCHFLRQAGHSEKAVSLLQAMVDFTFFKPDSVEGLPTKGQVEFFEPFWDSGEPRAGEKGARGWRAWMHQQERGGWVVVTPDDDDDEPEDDDQEIRDKTLPRWRIWLAAERARDQKHWRPWRPDKTKKQTEDDCEDPERQVLFDDIGQSLIRLSSQELRFQLIAAFLQFLGVPSGFSPPAACLYLAMDENSIFDHGLCDEKPLTFLNLSFSGVSCVGRTDQLGCRRWTRGHNREGEEFIRNVFHLVMPLFSGRERSQLCFSWLRYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNDFCLWKQYAHLEWLLGNTEDARKVFDTALSIAGSGELRDHEVCELSLLYAELELELAPDPRGAARARALHILTRLAENSPYGPYTGQVPAVHILKARKAYERALQDCLGETRVSDPPGTDSLDRLVSVVKCFMLFQYLTVGIDAAVQIYEQVFAKLKGAVSPEGPGPEHSASARSVSNALEAVTLMHTSLLRFHMKVSVYPLAPLRQALSEALKLYPGNQVLWRSYVQIQNQSHNASKTRRFFDAVARNAEPLEPWLFAIEAEKMRKRLVETVQRVDGRELHATIPETGLTHRIRALLENATRSDHGSHCPLLWRMYLNFLVSLGNKDRSKGVFYKALQNCPWAKVLYMDAVEYFPDEMQEVLDLMTEKELRVRLPVEELELLLED"

     misc_feature    590..877
                     /gene="NRDE2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(590..616,623..628,638..643,647..649,653..697,
                     704..712,716..724,746..754,764..769,773..778,785..805,
                     830..835,851..877)
                     /gene="NRDE2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    1046..2044
                     /gene="NRDE2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:462472"
ORIGIN      

acatttcccagagtgcaccgcgaccacgaaggtagcactaccgacgtccgatcgccggcgccgttttttgtagaggggccgggcggtgcggcctgtgatcatggcgctgttcccggcctttgcgggtgttagcgaggctcccgatagcgggagctccaggaaagaattagattggctgagcaacccaagcttttgtgttgggaccataacaactccgagccaacgaactgaagaggccacagcgcttgtttctgaggggtcaccgctgacgaggagccctgtgaaatcagacccttcagatgacagtgatgcgaacaggaagctcagacactccggcagaaagaagaagagagagaagaagaggaaaaggaagcatcagcaccacgagaaaaccaggagacgccatgggcagccaggtggcagcgcgtctgcgtctgcatcggacgccggttctgaccgggacgggtcttccagaggcagcagagacggcaaaagagaatcggagaagccaagtcaagaacacagtgctgctgcgcacatcggacgtcgctgcgtctggctggaggacctccaggctctgacggaagaaaccttcagaacagatacgaaaccagaccctgcaaactgggagtataagtccctgtaccgaggagacatagccaggtacaagaggaaaggagactcctgccttggcattaaccctaagaagcagcgcatatcctgggagggggcttctgcggcgaagaagcactcacacaggcgtgtcgagcgctacttcacgaagaagaacgtggggctgatgaacgctgacggggttgccgtcggcagcaagactggacctgcctcgtccgagccagtgtccttcatcccggtgaagggtgcggatgatgtggctcctcccgttacaacctggctgaaccctctggggatttatgatcagtccaccacgcagtggctgcaaggacagggtccttcagagcaggaatcaaagcagccagacccagagccagaccgagaggacgcgcttctcaaggccaaggtggaagagtttaacaggagggtgcgagagaatcctcgggatattcagctgtggatggcctttgttgcttttcaggacgaggtcatgaaaagccccggcctatatgccatcgaggaaggagggcaggagaagcggaagaggtccctgaagctcattctggagaagaagctggccattctggagcgagccatcgagagcaaccagagcagcgtggacctgaagctggccaagctgcagctctgcgcggagttctgggagccccccacgctgctcaaagagtggcagaagctgatcttcctacaccccaacaacaccgccctttggcagaaataccttctgttttgccagagccagttcagcaccttttcggtatcaaaaattcatagtctttatggaaaatgcctgagtactttgtcggccgtgaaggatggcagcatcctgtctcaccccgagctgcctggcaccgaggaggccatgtttgccctcttcctgcagcagtgccacttcctgcgccaggccggccactccgagaaggccgtctctctgctccaggccatggtggacttcaccttcttcaaacccgacagcgtggagggcctgcccaccaaaggacaggtagaattcttcgagcccttctgggacagcggagagccgagggcgggggagaagggcgcccgaggctggagggcctggatgcaccagcaggagcggggcggctgggtggtcgtcactccagacgatgacgacgatgaaccggaagacgatgaccaggaaatcagagataagactctgcccaggtggcggatctggctggccgctgagcgggcccgagaccagaagcactggcggccgtggcgccctgacaagaccaagaagcaaactgaggacgactgtgaggacccagagagacaggtgttgtttgacgacatcggacagtctctgatccgactttccagccaagaacttcggttccagctgatcgcggccttcctgcagttcctgggcgtgccttctggcttcagccctcccgccgcctgcctttacctggccatggacgagaacagcatcttcgatcacggactttgtgatgaaaagccgttgacttttctcaacctttcattttccggcgtgagctgtgttggccgcacggaccagttgggctgccggcgctggaccagaggtcacaaccgagagggcgaggagttcatccgcaacgtcttccacctggtgatgccgctgttctcaggcagagagcggtctcagctctgcttctcctggttacgatacgagattgcaaaggtcatttggtgtcttcacactaaaaacaagaagagattaaagtcacaaggaaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaatcgcaacgatttttgcctctggaagcagtatgcacatctggagtggttgctcggcaacacagaggacgccagaaaagtttttgatacggcactcagcatagcagggagcggagaactgagggaccatgaggtctgtgagctcagtctgctctacgctgagctggagctggagctggcaccagacccgagaggggccgccagggcccgagctcttcacatattaaccaggctggctgagaacagtccctatgggccctacactgggcaagtcccagccgttcacattctgaaagctcggaaggcttacgaacgtgcgctgcaggactgcttgggtgagacccgcgtctctgatccacctggcaccgattcccttgaccgccttgttagcgtggttaaatgctttatgctcttccagtatttgactgtggggattgacgccgctgtgcagatatacgagcaagtgtttgcgaaactgaagggcgctgtttccccagaaggcccaggccccgagcacagcgccagcgccaggagcgtgagcaatgctctcgaggccgtcacgctgatgcacacgagcctgctcaggttccacatgaaagtcagtgtctaccccctggcccctctgcggcaggcgctctcggaggccttgaagttgtatccgggcaaccaggttctttggaggtcgtatgtgcagattcagaaccagtcccacaatgccagtaagaccagaagattcttcgatgcagtcgccaggaatgcagaacccctggagccatggctgtttgcgattgaagctgagaaaatgaggaaaagactggtggagacggttcagagggtagatggcagagagctgcacgccacaattcccgagaccggcttgacgcaccggatcagagccctgttggaaaacgcgacccggagtgaccacggcagccactgccccttactgtggaggatgtatttgaatttcttggtgtccttaggaaataaggacaggagcaaaggtgtcttctacaaggcgctccagaattgtccttgggcaaaggtgttgtacatggacgctgtggagtacttccccgatgagatgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcctgtggaggagctggagcttctgcttgaggactagacaacacccccagcccttgtcgtctgccccacgggccaggatgagccagaggaaatggtggcacctgcgtgtcagatcctgtttctttctgggtttgtgtctgggttcagtctcacctctcacacattttcagatgtgcaaatgacacaaaagctctgttacatattgtatatgcaaatatgtatatgtatgtccatagacaagaatcaggtcgcacgatgaactaaacctattgtgcttggtacgtgtgtgttctgctcttctgcccagccggcgccagcccgccccggggaaggtggcccgcccacttggcacccatggtggtccttgcctgggcttctgggttttgcaggaaccaggatacggcctggttcctcaacgccaggaccttctccctggggctggttcgtgggagattttgctctcattttcagaccagggcagtggggagtcaggtaaaacctggtgttctggttctggcctgcaccgagtgtattaaagtttcttgttgttccccgagcccgacttggctatgccgccgtctgtggaccagcaacatcacctgggggcttgtcaacacacgggctcagctcagctctgcagggtcggagttggcgcctgggcagaaccccaggccctgctgtgccccgcaggggaggctgcctgtgcctgggggtgtgccgatggtagactgtcctgtgctctcactgtccagagcaccagcactgcttaaaaggtgcgggccctaactggccgcgtccttgtttggattttttagggctgtccagcttcttgctggtctttaaaagtcatgatctctagacttgctgaagaaaaatttctttggcaactcattgagaaaagccagtgctatggaatagggttttggctagaaacagacggctgttaggctgggggaaagcagctgggggaaagaggcagcccagctggagcactgtccagggctcagcctcagagcccacaggaagctggccagccacgcagagccactgccctgctgaatggcttcaagcctgaactcagggaaatgcaagaattaaaagagggagcagctctgggacttccagaggctctggagaagggtggggcttctgaacccctttgggacaagggaaggagtggtagaagactgttcacccctgaccttttgagatttcttgcaggaaacccccagtctctcagcaccagcactcctttcctgccccagaacccacagcccttccagaaagcaaagctccatttcctccggaggtcccagctctgcgaccccacggcctttgttgctgaagtgttaccagagatggctggtgtgcagtgatgaccactgcttgcccatcagatgctggtgaatggcgccacccggctctgggggcagcgggcactgaagtctgcactcccagaagcttccctgacagccaggctgcccacaggtgccgagtgaggccccacgccccacacgcaggatgagaaagagctcgctttattgggaatggagcactggaccacgggctcccacacgggtgctccgggaggtgcacagtgcacagcacgtgttgccgggaggtcagctggggtgggcgcccctgggcacctcccccgctgcctccctccaaggggttgggccaaccattttcttgaaggtaactgtagtctgctagagataaagcccctcaggggtgccttcctgttttttatagagaacattttctttagattttttgaagtcttcatttgttactttcattctgcgttctctcaaggccatcagaccagcttctgtacagattgcctgtaagaaagaacagtatgttcagaagtgaaatactttttaatttttattcttacaattcagagagctattttgtagtaaggtatatgttctctctgaggtggcttagactagagtgattaaggaagagactggccacaaaggccccagggtcctgtactggctccggtgccagccagtcgtgtggcctggcagctccattttcgttaaagggagtaatgtttctaagaaacagatgaaattatacccggaaatttagaggtaacagagtgtgtacctacttcatttacctacagttgtaagagaatacatattctggttaaataatgtaagtcagtatacattttattatatgtatcttttcaataattacttgccaaaaagtaaaaacataacccacgaaacatgatgcaataaatacccagtcctggcactgaggtatctatttggtcatggccacaggccatgtcgaatggttcagcagaaaagaaagataaagcattttgtaaactgaaataatgggcgtgtagctgtttactattgttgcaacttttctgaaggcttaaaaatattcaaagtgaaaaaagtggtgcaaaattaaatttttgttctaagtggaggagacgctatttaagctcaacagacgccaaggacgtgcagtccagggcaggtgccacacgaaaagccccggggctgcctcccacccccagccgagcacggtcctcccgtgagaagcacggtgcacccacattcggagctgccaggccttgcactatggtctggtcatctgggaaggcacgcgtgtgatgaaccaagaggtacgatgggcccaggctcccaccttgatgtcggcaccagagaggtcatctttagccatgatcaggtcatccaacgtcacgtcatcagccagtgtcattcggctggtgtggatctgaaagatgcgcttcttggtcttttcgtcgggcagggggaactcgattttcctgtcaatgcggcctgcaggtgaaacgggttcaggggcggccccgtgcggtcccggctctgcccgttcagggagaggcctgggccacgcgcacagtttcactgtcctctgggaaggaggtccaaagcttaaaaagtgaacattcacctttgtagttggtaagtttctatgtttgaattcatctgtttaaaagcaatcctctctgctaccttcagaaatgagtgtgagcaacggttcctgaacggcatgttcagtgcagaagggtgcaagagcaaacaaattacctgctgctgctttggggctaaatgaatgtagaaaatgaaaaactatcgtctgaattatttctttggggaaaagttcttgaggcttaaaagggagtatgtaggaaagaaaacatgtaaaaataaaattcaaagagccaccctggcagacattaccatgctcttacctacactcttagggagacagttttaagttattctaaatttcagtgcagtatctgccttcacgtgtatcgttttataacccgccagagcacacttaagaaacacacacagagattctccgtgatgaaacaaaagcaaacctgaccgggtctgataagtgctggatccaaagtttctattcggtttgtggccatgataaccttcacatcccctcttgagtcaaatccatccaactggttcaacagttccaacatcgttc

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