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2024-05-11 11:54:55, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_036565068            1370 bp    mRNA    linear   VRT 13-OCT-2020
DEFINITION  PREDICTED: Colossoma macropomum uncharacterized protein
            DDB_G0290685-like (LOC118804568), mRNA.
ACCESSION   XM_036565068
VERSION     XM_036565068.1
DBLINK      BioProject: PRJNA667941
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Colossoma macropomum (tambaqui)
  ORGANISM  Colossoma macropomum
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Characiformes; Characoidei; Colossoma.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_023496051.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Colossoma macropomum Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Colossoma macropomum"
                     /mol_type="mRNA"
                     /db_xref="taxon:42526"
                     /chromosome="Unknown"
     gene            1..1370
                     /gene="LOC118804568"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 69% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:118804568"
     CDS             1..1140
                     /gene="LOC118804568"
                     /codon_start=1
                     /product="uncharacterized protein DDB_G0290685-like"
                     /protein_id="XP_036420961.1"
                     /db_xref="GeneID:118804568"
                     /translation="
MRSGVNEVDQHEVDKHDEEAGDENDEGIYEVDQDEVHEGEVDDENHEEDVNEVDQDEVDKDEVGDENDEGVNEVDQDEVDEDQEVDGDGNDEEGVSEVDEDEVDGDENDEERVNEVDQDEVDEELGDENNNDGINEGNEDDEVGDENEEGVNEVDLDEVDDEVDGEENDEKGVSEVDQDEVDGDKNDEEGVSEVDQDEVDGDKNDEEGVSEVDQDEVDGDKNDEKGVSEVDQDEVDGDKNDEEGVSEVDQDEVDDEETDGDENDEEGVNEVDQDDANENNINMRVRMMRLMVRIMSMMKLRMRLIKRRVMRMKTEVDQHEGDEVDEVDGDENKDEPNCGLADKIRRYYIFTNFPVISEQKYISCYRFAESLPFFLNWYR"
     misc_feature    <34..810
                     /gene="LOC118804568"
                     /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904;
                     TIGR00927"
                     /db_xref="CDD:273344"
ORIGIN      
atgaggagtggggttaatgaggttgatcaacatgaggtggacaagcatgatgaggaagctggtgatgagaatgatgaggggatttatgaggttgatcaggatgaggttcatgagggtgaggttgatgatgagaaccatgaggaggatgttaatgaggttgatcaggatgaggttgataaggatgaagttggtgatgagaatgatgagggggttaatgaagttgatcaggatgaggttgatgaggatcaggaagttgatggtgatgggaatgatgaggagggtgttagtgaggttgatgaggatgaggttgatggtgatgaaaacgatgaggagagggttaatgaggttgatcaggatgaggttgatgaggaacttggtgatgagaataataatgacgggattaatgagggtaatgaagatgatgaagttggtgatgaaaatgaggagggggttaatgaggttgatttggatgaggttgatgatgaagttgatggtgaagagaatgacgagaagggggttagtgaggttgatcaggatgaggttgatggtgataagaatgatgaggagggggttagtgaggttgatcaggatgaggttgatggtgataagaatgatgaggagggggttagtgaggttgatcaggatgaggttgatggtgataagaatgatgagaagggggttagtgaggttgatcaggatgaggttgatggtgataagaatgatgaggagggggttagtgaggttgatcaggatgaggttgatgatgaggaaactgatggcgatgagaacgatgaggagggggttaatgaggttgatcaggatgatgcgaatgagaataatattaacatgagggtgaggatgatgaggttgatggtgagaataatgagcatgatgaagcttaggatgaggttgatcaagagaagggtaatgaggatgaagacagaggttgatcagcacgagggtgacgaggttgatgaggttgatggtgatgagaataaggatgaacctaactgtggtttggctgataaaatcagacgatattacattttcacaaactttcctgtcatatctgagcagaaatatatcagctgttatcggtttgcagaatctttacctttttttttaaattggtaccgttgaccatattcatttcagttgggcgttactactaaatctacagggctactctggtctaaatctaattcagacaacatggtgaacgccacaaggtctctcagttacccttaagaaaacaacattaggctgaacgggaacgacacactagctctgttggcatttttgtcgaaccagttgagggatttatcattcactcagattactcctcagcctttcacgtaaacattaactcc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]