LOCUS       XM_035890918            2913 bp    mRNA    linear   VRT 20-AUG-2020
DEFINITION  PREDICTED: Egretta garzetta argonaute RISC component 1 (AGO1),
            mRNA.
ACCESSION   XM_035890918
VERSION     XM_035890918.1
DBLINK      BioProject: PRJNA253831
KEYWORDS    RefSeq.
SOURCE      Egretta garzetta (little egret)
  ORGANISM  Egretta garzetta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_009259109.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Egretta garzetta Annotation Release
                                           101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Egretta garzetta"
                     /mol_type="mRNA"
                     /isolate="BGI_Z169"
                     /db_xref="taxon:188379"
                     /chromosome="Unknown"
                     /sex="male"
                     /country="China"
     gene            1..2913
                     /gene="AGO1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 43 Proteins, and 98% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:104123134"
     CDS             199..2445
                     /gene="AGO1"
                     /codon_start=1
                     /product="protein argonaute-1"
                     /protein_id="XP_035746811.1"
                     /db_xref="GeneID:104123134"
                     /translation="

MVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNERGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQALAKAVQVHQDTLRTMYFA"

     misc_feature    241..465
                     /gene="AGO1"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    493..645
                     /gene="AGO1"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    646..1008
                     /gene="AGO1"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(802..804,847..849,889..891,901..903,955..957,
                     976..978,982..984)
                     /gene="AGO1"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1141..2316
                     /gene="AGO1"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1552..1554,1564..1566,1600..1611,1618..1620,
                     1642..1644,1651..1653,1663..1665,1675..1677)
                     /gene="AGO1"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1756..1758,1762..1764,1972..1974,2284..2286)
                     /gene="AGO1"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

gcaggcgcatacctgccaccattgcagcaggtatttcaagcgccgcgccggcccgggataggaaccgttgggaagcccatcaagctcttggccaactactttgaagtggacattcccaagattgatgtgtatcactatgaagtggatatcaaacccgacaaatgtccacgcagagtcaacagggaagtcgtggagtacatggtacagcacttcaaaccgcagatcttcggtgaccgaaagccagtctatgatgggaagaagaacatctacactgtcacggccttgcccattggaaacgagcgggttgactttgaggtgacgatcccaggggaaggcaaggacaggatatttaaggtctccatcaaatggatggccatcgtgagctggcgcatgctgcacgaggccctggtcagcgggcagatccccgtccccctggagtccgtccaggcactggatgttgccatgaggcacctggcttccatgaggtacactcctgtcggccgctccttcttctccccccccgaaggctactaccaccccctgggaggcggcagggaggtctggtttggtttccaccagtcggtcaggcccgccatgtggaagatgatgctcaacattgatgtgtcggccaccgccttctacaaagcccagcccgtaatcgagttcatgtgcgaggtgctggacatccggaacatcgacgagcagccgaagcccctgacggactcgcagagagtgcgtttcaccaaggagatcaaaggtctgaaagtcgaggttacccactgcgggcagatgaagaggaaataccgcgtgtgtaacgttaccaggcggccggccagccaccagacgtttcccctgcagctggagagcggtcagacagtggagtgcacagtggctcagtactttaagcagaaatacaacctgcagctgaagtacccccacctaccctgtctccaggttggccaggagcagaagcacacgtacctgcccttggaggtgtgcaacatcgtggcaggccagcggtgcatcaagaagctcacagacaatcagacgtcaaccatgatcaaagcaacagccaggtctgccccggacaggcaggaggaaatcagtcgcctgatgaagaacgccagctacaacctggatccgtacattcaggagtttgggatcaaggtgaaagatgacatgacggaggtgacggggagggtcctgccggcacccatcctgcagtacggaggcaggaaccgggccattgcaactcccaaccaaggcgtgtgggacatgcgagggaagcagttctacaacggcattgagatcaaagtctgggcgattgcttgctttgccccgcagaagcagtgtcgagaggaggtgctgaagaactttacggaccagctgcgcaagatctccaaggatgcagggatgcccatccaaggccagccctgtttctgtaaatacgcccagggtgcagacagcgtggagcccatgtttcgacacctcaagaacacctattcggggcttcagctcatcattgtcatcctgccggggaaaacaccggtgtacgccgaggtgaagcgcgttggggacacgctcctgggaatggccacgcagtgcgtccaggtcaaaaacgtggtgaaaacctccccgcagaccctttccaacctctgcctcaagatcaacgtcaagcttggcgggatcaacaacatccttgtgcctcaccagcgctctgccgtctttcagcagccggtgatcttcctcggggccgatgtcactcacccgccggcaggagatgggaagaaaccctccataacggctgttgtgggcagcatggacgcccaccccagccggtactgtgccacggtgcgcgtgcagcgtcctcgccaggaaatcatcgaggacttgtcctacatggtgagggagctcctcatccagttctacaaatccacccgcttcaaacccacccggatcatcttctaccgcgacggcgttcccgaggggcagctcccgcagatccttcactacgagctcctagcgatcagagacgcctgcatcaaactggaaaaggattaccagcctggcatcacctacatcgttgtccagaaaaggcatcacacccgtctcttctgcgcagacaagaacgagaggggtaccagccggccgtcccattactacgtactctgggatgacaaccggttcaccgcggatgagctgcagatcctcacgtaccagctgtgccatacttacgtgcgctgcacccgctcggtctccatcccggccccggcgtactacgcccgactggtggcgttcagagcgcggtaccatctcgtggataaggagcatgacagtggcgagggcagccatatatctggacagagcaacggcagagacccccaggccttggcgaaggctgtgcaggttcatcaggacactttacgtaccatgtactttgcttgaaagcctaacttttgttacctcactcaagaaagctttcagatttgtaggagccatacaaaaaaggaagcattgggacaccttgtttattttccaatgagaaatcactgcagggcaggcagcgtcgattcgaggcaggagaccagcaccacgggacagaaagatccaacacctttgtaggattggaagagactgatgattatttttttaatttttctggctttgcaaaattttgacctgaccaaacacacgaaggcattcaaggaagggataagactcccaggaggcggaagcaggttttcatttttaagatgcaatactatagactcctgactgtgaaatggcggatttggtcctccgttgcccaccaggcgctgtcccaagtgtctgttaccctgtaactgttggcagaagacctaaataaaagcaatgtgaatacgttggggtgacactcctgagtcggattgcgtg

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