LOCUS       XM_035804505            1943 bp    mRNA    linear   INV 13-AUG-2020
DEFINITION  PREDICTED: Branchiostoma floridae uncharacterized LOC118405102
            (LOC118405102), mRNA.
ACCESSION   XM_035804505
VERSION     XM_035804505.1
DBLINK      BioProject: PRJNA33245
KEYWORDS    RefSeq; corrected model.
SOURCE      Branchiostoma floridae (Florida lancelet)
  ORGANISM  Branchiostoma floridae
            Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii;
            Amphioxiformes; Branchiostomatidae; Branchiostoma.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Yue,J.X., Kozmikova,I., Ono,H., Nossa,C.W., Kozmik,Z., Putnam,N.H.,
            Yu,J.K. and Holland,L.Z.
  TITLE     Conserved non-coding elements in the most distant genera of
            cephalochordates: the Goldilocks principle
  JOURNAL   Genome Biol Evol (2016) In press
   PUBMED   27412606
  REMARK    Publication Status: Available-Online prior to print
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_049995.1) and transcript sequence (GETA01044094.1) annotated
            using gene prediction method: Gnomon, supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Branchiostoma floridae Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            assembly gap :: added 43 transcript bases to patch genome assembly
                            gap
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                GETA01044094.1     1-43
            44-92               ABEP03000364.1     7920616-7920664
            93-306              ABEP03000364.1     7921333-7921546
            307-1943            ABEP03000364.1     7922065-7923701
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Branchiostoma floridae"
                     /mol_type="mRNA"
                     /db_xref="taxon:7739"
                     /chromosome="17"
     gene            1..1943
                     /gene="LOC118405102"
                     /note="The sequence of the model RefSeq transcript was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: added 43 bases not found in
                     genome assembly; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, and 98% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 5 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:118405102"
     CDS             216..590
                     /gene="LOC118405102"
                     /codon_start=1
                     /product="uncharacterized protein LOC118405102"
                     /protein_id="XP_035660398.1"
                     /db_xref="GeneID:118405102"
                     /translation="

MGMVSSKRLPDAEGWYQVGVVGTGNKVVGAGRLRITDQFLEFIGQDGDIGQWSLTRVLSYGVEPNIFYVQIEEDVVTRTGRYLVFKTPAAGKICRTVERMADKIRKEKQRQESQGNMGQEATAC"

ORIGIN      

ggaacagtaacgcagtagtgacgcaagaacttgtggtgttaagagttttgttttttgtcggacttccgttttcaagggtctgcaaacgtaagccacggagctatgcaaaggtgaaagttttcaaaccacaaacgctgccgcggttgacgagtgaacatcgattgttagcacagctgtcagccgtaatcgaacggtcaggagcgacatctagcggaatgggcatggttagcagcaagcgcctgcctgatgcggagggctggtaccaggttggagtggtggggacagggaataaagtcgtgggcgcaggaagactgcgaatcacagaccagtttctagaattcattggccaagatggcgacatcggacagtggtctctcaccagagttctgagttacggcgtagaaccgaacattttctatgtgcagattgaagaggacgtggtcaccaggactgggcggtatctggtgttcaaaactcccgccgctgggaagatatgtaggacagtagagagaatggcggacaagattcggaaagagaaacagaggcaggagtcgcagggcaacatgggacaggaggcaacggcctgttgaccttgacctttgaaggacatttggtggcatgttgaccttgacctttttttttattgattgaatgatggtcgagaatgactgataaaattcggaaggaaaaacagacaagagtcgcagggcaacatgggacaggaggcaatgacctgctgaccttgaactttgaaggacatttgctggtctgttgacctttgatctttgaaggacatttccttccctttgaactctatggaatgatggtcgagtattgctgataagattcggaagaaaaacagagacaagagtctcaacttcggacagcaggaagcaaagacctgttgaccttgaactttgaaggacatttggaattacttccggttgaactcgatggaatgatggtcgagaatagctctgataagatttagaagacaaacagagacatgagtccagcaagtgtatttcggtcaggacggcaccgcctgttgaccttgaactttggagggcattaaaattacctatgtttgaactcagtgaactaatgattgagaataatagacaagttttgcaataagaaacagagaaaagagtcacatggcgacttcggaaaggaatctacgaagctggtgaactcgaagtttggacgacttttgtctacctgtatttgtattccatgtaacaatggcttggagaaaaaggacaaaagaacaaagtctttgagtgaaaaaaaaagacgacaaaatcagtgcagtaaaattcttagtgaaccctttttctttattgcgctgtaaagatactttgctgtatagatacttttctgaacggcatttgtgtcatgcaataaatatagttattggatatatatttaagggtttacatataaaagatacttttaattaacgtcacaacattttttctgtttcaaactttcatgtttactaggaagttctttcgattttgcccatgccatttccttgtcctaacaaataactcctttctaggcacgcgcacttgactacataaagccatcacaaccaattagaccaacacaaaagagacaccacaaaatagtactattcttagcgtgaagtctaataaaacaaatgtgatctcttcataaatgtatcgcaatgccattacaattgtctatgtatgtgatgactacatcaattattcaacgttttcaccacacgaaaaaggtcgggtgaagttatcaataaggtctagacattcatgggtgttaagggaggctatggtacaatgtcgcagccaaacatggccgtcaactttcacatgtactgacaaggctaacatttaggttacagaatgggggaatgtgaatttacgaggccgaattaaaggcgttttgttacatcaaga

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