LOCUS       XM_035101898            8397 bp    mRNA    linear   VRT 23-OCT-2023
DEFINITION  PREDICTED: Zootoca vivipara NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), mRNA.
ACCESSION   XM_035101898
VERSION     XM_035101898.2
DBLINK      BioProject: PRJNA1028606
KEYWORDS    RefSeq.
SOURCE      Zootoca vivipara (common lizard)
  ORGANISM  Zootoca vivipara
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata;
            Laterata; Lacertibaenia; Lacertidae; Zootoca.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083276) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 23, 2023 this sequence version replaced XM_035101898.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963506605.1-RS_2023_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/17/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8397
                     /organism="Zootoca vivipara"
                     /mol_type="mRNA"
                     /db_xref="taxon:8524"
                     /chromosome="1"
     gene            1..8397
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 8 Proteins"
                     /db_xref="GeneID:118078173"
     CDS             150..3614
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_034957789.1"
                     /db_xref="GeneID:118078173"
                     /translation="

MALFPAFAGAAKPGEAPAGETECSKRELNWLTNPSFCSEDALRLHQHALKATDLASDESLLQRTTSSLETLRESEVSESVQKPAKKRKKKKKQRDHKKVKKRSRKHQGTSESESDADDVKDNRNNEKEAELNLGEKASNVSIHSIWLDDVQGVTAEVFRTDKKPDPANWQYKSLYRGNIARYRRRSNFCLGVDPRRQHIAWESSSAEKKPSHKRPERYFAKGGRKLLNADGIPVSTKSQGSLSGPTAWIPISEQDSADVLATGWANPLGIYDPGTTLWLQGKGPPEHDSRKPQEAQESSENGDSRLLARVEDYNRKVREDPGDIKAWMDFVSFQDEVMRGPSCYAISEGERETRKVSLKLILEKKLAILERAIESNPNNADLKLARLKLCTEFWEPSAVIKEWQKLVFLHPNNPALWQKYLLFCQSQFSTFAVSKVHSLYGKCLSTLSAVHDGSMVSHPALPHTEEAMLAIFLQQCHFLRQAGHSEKAISLFQALIDFTFLKPDSVRELPTRRQVEFFEPFWDSGEPRIGEKGAKGWKAWMHQQEKGGWVAIIPPDEDEEEAEEEEEIKDRTLPKWQNWLHVERSREGRHWLPWRPDKTKKETVDDCEDPERQVLFDDLGPSLIQISSPDLQFQLLCSFLQFLGVPCSCGLLPSFLYTAMDENNIFEDQQHGQRPLTSFDLSLPGVSRIGQMGSMLQGVRRIGHPKEGEEFIQNFFHMILPLLSGKEKSNLSNFWLQYEVSKVIQCLETGNKKKLKWQGKRSKKLAKNLLKTHENRNDVSLWRLYAYLEWLLGNVEDARKVFDMSLSTAGTAGIQNPQLCNLGLLYAELEAESLGSLEGTLESRAVHILTRLAEQGPYAPYSGQTLSVNILRARKTYEHLLQDYLSKRGASEQEQIHDYSDHLVGLVGCYTLFQYLTLGIDSAVSVYRQVFEKLEGESPGGQNCAATLEAVALMHVHLLRYHMRTSVYPLAPLREALLGALKRYPSNQPLWRAYIQIQSKSHNASKARRFFDSVARAAKSLEPWLFAIKAEQMRKKLVESVQRVATGDVYATIPETGLTNRIKALFEHAIETENGAHCPLLWRLYIYFMVSLGDKGKSKGVFYRALQNCPWTKVLYMDAISYFPDELQEILDLMTEKELRVRVPIEELELLLED"

     misc_feature    621..902
                     /gene="NRDE2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(621..644,651..656,666..671,675..677,681..725,
                     732..740,744..752,774..782,792..797,801..806,813..833,
                     858..869,879..902)
                     /gene="NRDE2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    1086..2081
                     /gene="NRDE2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:462472"
ORIGIN      

ttttggagctgaagccgggcgaaactacatttcccggcatgctcgggtaagtcgctgccgctgccgccatcttgtttcggcccacgcgatttcttccgtgggaacggcatccgggaagcgccaccggtgtttccgtgagcagggacgggatggctctttttccggctttcgcgggcgctgctaaacccggagaggcgccagcgggcgagaccgagtgctccaagagagaattgaactggctaaccaacccgagcttctgcagtgaagatgctctgagactacaccagcatgctttaaaggccacagaccttgcctcggacgaatccctgctccaaagaacaacctccagcttagagacattgcgagaaagtgaagtcagcgaaagtgtccaaaagccagctaagaaaagaaagaaaaagaaaaaacagcgagaccacaagaaagtaaaaaagagaagtagaaagcatcagggaacaagtgaatcggaatcagatgctgatgatgtgaaagacaatagaaataatgaaaaagaagcagaactgaatttaggagaaaaagcttcaaatgtgagcattcactccatctggctggatgatgttcagggtgtgacagcagaagtattcagaacagataagaaaccagatcctgccaactggcagtataagtctctgtatcgagggaacattgcaagatacaggagaagaagcaacttctgtcttggcgttgatccaaggaggcaacatattgcctgggagagttcctcagcggagaaaaagccctcccataagcggcctgagcgttactttgccaaaggtggccggaagctgttgaatgcggatggcatccccgtcagcacaaaaagtcaaggctctttgtctggcccaactgcttggatacccatttcggagcaggactcagctgatgttctggccacaggctgggcaaatcctcttgggatttatgatccagggaccacgttgtggctgcaagggaaggggccccctgagcacgattcacgaaagccgcaggaagcgcaagagagctctgagaatggggattcccgcctcctggccagagtggaggactataacaggaaggtcagagaggaccctggagatatcaaagcatggatggattttgtttcttttcaggatgaagtcatgagaggccccagctgctatgccatcagcgagggagaacgggaaacgaggaaggtgtccctcaagctcatcttggagaagaagctggccattctggaaagagctattgagagcaacccaaacaacgctgacctgaaactggcccggctgaagctttgcacagagttttgggagccgtcggctgtgatcaaggaatggcagaaattggtgttcttgcatccaaacaacccggccctgtggcagaaatatctcctgttctgccagagtcagttcagcacctttgcagtttccaaagttcacagtctctacgggaaatgcctgagtactttgtcagcggtgcacgatggcagtatggtgtctcatccagccctgccgcacacagaggaagccatgctggccatcttccttcagcagtgccatttcctccggcaggccggccattcggagaaagcaatatcgttgttccaggccctgattgacttcaccttcctgaaaccagatagcgtaagggaactgccaacaaggcggcaggtggagttctttgagccgttttgggacagtggcgagcctcggattggagaaaaaggagcgaaaggctggaaggcctggatgcaccaacaagaaaagggtggctgggttgccatcattccacctgatgaagatgaggaagaggcggaggaggaggaagaaataaaggatagaactttacccaagtggcaaaactggctgcatgttgaacgttctcgtgaaggaaggcactggctgccttggcggccggacaaaaccaagaaggagacagtagatgattgtgaagatccagagagacaggtcctgtttgatgaccttggtccatcgctaatacaaatttccagcccagatcttcagtttcagctgctctgctcgtttctgcaattcttaggtgtcccatgtagctgtggcctccttccttccttcctctacacagcaatggatgagaacaacatctttgaggatcagcagcatggccaacgacctctgacttcttttgacctgtcacttcctggagtcagtagaattggccagatgggctcgatgctccaaggagttagacgtattggccaccccaaagaaggggaggagttcatacagaatttcttccatatgattctgcctctgctttcaggaaaagaaaaatccaatctatccaacttttggcttcagtatgaagtctctaaggttattcagtgtttggaaacaggcaacaaaaagaaactgaaatggcaagggaagagaagtaagaaattagccaagaaccttcttaagacccatgagaacagaaacgatgtctccctttggcgactctacgcctacctggagtggttgcttggcaacgtggaagatgctaggaaagtttttgatatgtctctgagcacggcgggaacagctgggatccagaacccccagctctgtaacctgggcctgctttatgccgaactggaagcagagtcgctggggagcctggagggaacgctcgagtctcgcgctgttcacatattgaccaggctggccgagcaaggaccttacgcgccttacagtggacagacattatccgtgaacattttgagagctcggaaaacatacgagcatcttctccaggattacttgagcaagagaggcgcctctgaacaagaacagatccacgactactccgaccacctcgttggcttggttggttgttacacccttttccagtatttgactcttgggattgattctgcagtgtcagtatacaggcaggtttttgagaagctggaaggcgaaagccctggcggtcagaactgtgccgccacccttgaagctgtcgccctgatgcatgtgcatttgctcagataccacatgagaacgagcgtctatcctttggctcccctccgcgaagcactgctgggggctttgaagaggtatcctagcaaccagcctctctggagggcatatatccagatccaaagcaagtcgcacaacgctagcaaagcgcggcggttttttgacagcgttgcaagggccgcgaagtcactggagccgtggctgtttgcaatcaaagctgagcagatgaggaaaaagcttgtggaaagtgtgcaaagagtagccactggcgatgtgtatgcaaccatccccgaaactgggttaaccaatcgaatcaaggctttatttgaacatgccattgagactgaaaacggtgctcattgtccattgctttggaggctatatatatactttatggtttctttaggagataaaggaaaaagtaaaggagtgttttatagagcgcttcaaaactgcccctggacaaaagtgctgtatatggatgctataagctattttccagatgagctgcaagagatccttgatctaatgaccgagaaggagctgagagtgcgggtaccaattgaagagctggagctgctcttggaagactagagaatgatgtgaagacagcaagtggaccttggcttgagccttcagtctctgcccctggagagaaaataattatacacttcctttaacagatgagaaactatttttcagcacagctttcttgtggttggtttccccagtgctgttaagtgctcttgtgcagcaaactgccaatatgggtgactcgatctgttgctgtcgtcggacatcgtcacatgcatttgtgtgattatacagtagccaaaggacaagccattctctctcagctgatagatgcatgaacacatgatcagaatagttttataggttgtacagaacatgaaaatgtgcccttgcgtgatgactcacgtgatgttttaggcagcaaagccttgtgtaaccaaatttttattggtttgtaaatggcagaggatgtaaatatgcttgtaaaggtacataaaatatttttgaaatggattttatttctatatctcccccccccccaaaaggcggaaacacttaagctctgcttttagtgaatctttccttgttgcacctgtggaatttaacatggtcacacagctgccaattcacatgccacactcaacagtaattttgaaccctcccagcatatgtattgtatgaaattgtttcctattcatttcagaagtttgggctacccactactgaaatcaggtgggatgttaagaattgcgaatgaggatgcacacaggttggcaggtaagattttgaaaaagtaaatgctaagccaggcttgtggaatagagctgcatatccgagcgttgttggttgtaaaagaagtgagctgtgtgtgctctctagggcactctcctgtgatgctgtgagggcatcctaaatccagagcagtttgtggatctgcccctctgattaggggagatttctcctggggcagccccatcccagctgacattactgctcctctggccagggacagctttggattcagcagatgctctcccatcttgagggaacggggaagatagagatgacttggctgttgaagccttgattgcttcaagattagattattgcaatgcactctaggtggggctgcccttgaagacaactcagaaacttcagttggtccaaaacacagcagacccagatactggcctgcgttcagtttagctcgcatataaatcccgttttaaaacagctgcacaggttgccagtttgttttcgggcccaattcaaggtgctcacattggtgtttaaagccctaaacaactcaggccccaaatatctgaaagactacctcctcccacacagaccttctcaggtgcaaaggggggtctttctggtatttcctgcatcctcagaggtttggggagagacggaggtggcctcggtagtggcccctaaactgtggaatcccttcctcactgaggtgcatcttgcaccattgtgatacagcttccagataatgctgaagacgcacctctttaccctggcttttgacacttgacatgtattatttcagggccccgtatttttatggttgtaaattgtttttagtactgtgttttaatgctgcaacccaccttggaaccttataaagggcagacaataaatgagtaaataacaaaaacacagcaagcactctgggattgaaagcaaggagtgaacagcagcttactttgtttgcactgggacttctattgctattactggaagtgttttaacaagagagggacgtgaagcctctgtttataggattggaaacctagtaacaattacagggatgcctctggatatcacaatacacccccttcgggcaaaacagctagtgtttcctataggaagcagagagggcagttgctttcatgctgctagaatccgaatggaagcagcagagagcacaactcagctatgaaagcttttaattaattatcctttattccataagcaatgccttgcgacacttgctgcaaggtgcaattaactaaataaagctttggactgtcctgaaatctaatataggctgtcaacaaccaggccgctcaagtattcagcaggggtgttacgagctctggccacaaatcatgccattaaccagatctcagaggagccaaaatagtattctcagaggtatgttctcttcagcagaggtaattcagtggtgggcagagaattttgtttcaccgccttattccaaagggagtgtggtgcaaagcagcctcttaagagtagctgcaaaagttttaccgcatttacttttctgaaactcttcttcagataacaaggtggggacaaaaaaaagtatttgcataattgaattcctggtctgtgctggtagccacatatatttgaaaataaatcccaccataatcaatgggacataccatcaaacctaagatcaagtccacaattaaggtatattgggcatctaaatgtttttggctttatgggttgggggcatctgcctatgtcaaaaacctgaaacctgttaaattgtcctggctgcaagccatggaaatctggccactggccacctggataagtgaagacttgggcattactttaaaaagccaatattctttggggaaagacaaggcatttaacccattttccaaactgacttaaacttgcagtgaaaaaaaaatatacccaactgtgtagacatgcaaaattagggcttccactcaggagagttgcccctattggctattagctttcctgttatgtgagtttctaaacaagagcatatggagctttagacaggaaaagacataggctgttcttctgtggagcaggacagtgtgccttcctcttagaaagtcctcctacccccttacctggttaaagtttccactggcagaaaccttaacccacatttgctgttaaccagcatttggatacgggttccaaatactgctgaatggtaaaatctggttcacatctatcatggccaagatcagtaccttaaccacagctgacgtaaccactgagaatttctacaggggcatgcaactgcagttaagttcctgggagtatttatggggggaaacccagtggtgtcccaccagcagaactacttcccttccctctgccccactttggtccagaggactgggggatcctctagagcagaatggctgggggaggagggaattgcaaggaagaggagaggaaggagaagttgcattcataagaagtccactcacacaacactggatgtccccttaagtgttctcatcatagccacagaatgacacgtataaagaacggtggttgctctggcaacagggcaaacaagcttaattaatccacaccgttgtcaaactgaataaacagtacatggatggacggagaaatctgttggtcatgagtgtcccaactatttgtaagcgcagctcacctacaactagtgacgaagagatgagatggctctgtcagtgaaatacaatctgcaggcggccacctgctcatggcagctcctctttgtgattatactcctctagcaacatctatttctagcgcttagcattgtcacagcctgtcttgttcagcttgagataatacaagagcaatttgctttcgacgtggtttaaattgttcaccgaagccatgagaaaccccctcaggctcagaacacatgcttcataattcagaagtagagggaatctgctagcagttaatgatgcgccttgtagtgcagcagagaggtaaaatacgcccccagttgttttgactaatacacatatacataaacacaattcaaacccctttcagttttggtgctgctttttgctttctcaggaggaaataagtgcctggaggcttgttacctgtaggaactctccccatacctagatgccaacaacagctgtgggttaagttccctcgctccatgaatgcacaacccaacctggagaatctctgtaggaccccaaagcctggaattccaacagtggtttgaccatggaagttatgtttatgtctctgtgatcgacagagttatttagactctgactgccctttacccacagacagccttggccgtgacatctgaccctcaatccatattaacattttgtgaatttggcatgttcttggagccaggcaggaattgatgaaagatgcagggttctgttcagccttccaagtcatttttgcttcttctagtccatctcatttccactgagcatctgttaccacacgttgtctaactgcttatctggatggattttccaataatgtgggcttttgaaagcattcccagcaaaatgtttttcaacattatttcggcattctttctcagtcgctgtgcaatcatataaatgtctgcgcagctaggctggagttttggcaggcttcccacaaccacccttaagggacatggctccttttcccccactcagttctttccactacagtggtagcctccaagccttgttttttttattatcgaatttccttcagattctcttgctagtgtttttttctgttgcaattactacacttaagtacccatttcttcagcttttatcctccctttctcttttacagttttatctgcccctctctttttgtacatttagtgctgtatctttcctcaatcgcctttttgtgcatccccacctagattgggtttatggctcgacttggggatttccccataagtgcctgtcctatgacagcaaaaaacttaacacctgaaattctggagattcatatttgttactttagctatttacttctagttgcacccaggtctaaatgtaacaaccagccatggaaaagttatggagtcaatcggtttggc

//