2024-04-27 14:13:29, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_034344404 1176 bp mRNA linear PLN 14-MAY-2020 DEFINITION PREDICTED: Prunus dulcis dr1-associated corepressor (LOC117615337), mRNA. ACCESSION XM_034344404 VERSION XM_034344404.1 DBLINK BioProject: PRJNA631757 KEYWORDS RefSeq. SOURCE Prunus dulcis (almond) ORGANISM Prunus dulcis Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_047650.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Prunus dulcis Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1176 /organism="Prunus dulcis" /mol_type="mRNA" /db_xref="taxon:3755" /chromosome="1" gene 1..1176 /gene="LOC117615337" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:117615337" CDS 71..895 /gene="LOC117615337" /codon_start=1 /product="dr1-associated corepressor" /protein_id="XP_034200295.1" /db_xref="GeneID:117615337" /translation="
MAEEQNVAREEDNIAGEEKAEQAEENAEQAEENAEQEEDDPEKAVENAAVKEKAKVAQEEENAEPIRSENSQIRPEFPNTRVKRIMKLDRGINKVNSEALLLVSCSAQLFLEFLAERSAEVATEKKRKIVKLEHMRVAVKRHRPTSDFLLDELPVPSQPSDHQPTDRSSSRTVSHAPAPARRDRNRSRAVSDKPAPAGTRRIDHFFRTKEIPIQTEQSLIETEEASIEIDEAPIETDEGPIETDEASIETDEASIETDEGPIETGEGPIETNES"
misc_feature 293..487 /gene="LOC117615337" /note="Histone-like transcription factor (CBF/NF-Y) and archaeal histone; Region: CBFD_NFYB_HMF; pfam00808" /db_xref="CDD:395650" ORIGIN
ttcaaaaccctaacacaacattttcgtttttcgattacttattcctgaccagagagcgtcgcaaccatcaatggcagaagagcagaacgtagcacgagaagaagataacatagcaggagaagagaaagcagagcaagcagaagagaacgcagagcaagcagaagagaacgcagagcaagaagaagatgacccagaaaaagcagtagagaatgcagcagtaaaggaaaaagcgaaggtagcacaagaagaagagaacgcagaaccgatccgatccgaaaattcacagatccgacccgaatttccgaatactcgggtgaagaggataatgaagctggacaggggcatcaacaaggtaaattcagaagccttactccttgtatcgtgctccgcccagctcttcctggagttcctggcggagaggtcggctgaggttgcgacggagaagaagcgcaagatcgtgaagctcgaacacatgcgagtcgccgtcaagaggcatcgcccgaccagcgatttccttttggatgagcttcccgtgccctctcagccgtccgatcatcagcctactgatcgaagcagctcgcgcaccgtttcccatgctccagctccggctagacgagatcggaaccgctctcgcgccgtttccgataaaccagctccagctggcactcgccggatcgatcacttctttcggacaaaagaaatcccgattcagaccgaacaatccctaattgagaccgaggaagcttcaattgagatcgatgaagcccccattgagaccgacgaaggtccaattgagaccgatgaagcttcaatagagaccgacgaagcttcaatagagaccgacgaaggtccaattgagaccggtgaagggccaattgagaccaacgagtcctagatcttcgttcgttctttgcctgtcgtaaagaagcaaaatcattttgtttggtcaagttgtaattgtgagaaaccaatggaaaatatctgatggacacaaggagattaattctaatttttctttataatcaattttctatttttcctatggatttgatatttatgattgacctaagcactgcagtgaagctccacggcaatggggggaaaatctctaccgttctgctcccagcccatgtatgtttttgtgttgtttaatttaatgcaaaagttctttacttt
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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