2024-04-29 04:48:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_033606175 1296 bp mRNA linear PLN 20-APR-2020 DEFINITION Dissoconium aciculare CBS 342.82 uncharacterized protein (K489DRAFT_385887), partial mRNA. ACCESSION XM_033606175 VERSION XM_033606175.1 DBLINK BioProject: PRJNA625769 BioSample: SAMN02745884 KEYWORDS RefSeq. SOURCE Dissoconium aciculare CBS 342.82 ORGANISM Dissoconium aciculare CBS 342.82 Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Dissoconiaceae; Dissoconium. REFERENCE 1 (bases 1 to 1296) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-APR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 2 (bases 1 to 1296) AUTHORS Haridas,S., Albert,R., Binder,M., Bloem,J., Labutti,K., Salamov,A., Andreopoulos,B., Baker,S.E., Barry,K., Bills,G., Bluhm,B.H., Cannon,C., Castanera,R., Culley,D.E., Daum,C., Ezra,D., Gonzalez,J.B., Henrissat,B., Kuo,A., Liang,C., Lipzen,A., Lutzoni,F., Magnuson,J., Mondo,S., Nolan,M., Ohm,R., Pangilinan,J., Park,H.-J., Ramirez,L., Alfaro,M., Sun,H., Tritt,A., Yoshinaga,Y., Zwiers,L.-H., Turgeon,B.G., Goodwin,S.B., Spatafora,J.W., Crous,P.W. and Grigoriev,I.V. CONSRTM DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (27-JAN-2020) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_022984951). ##Metadata-START## Organism Display Name :: Dissoconium aciculare CBS 342.82 GOLD Stamp ID :: Gp0033050 ##Metadata-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1296 /organism="Dissoconium aciculare CBS 342.82" /mol_type="mRNA" /strain="CBS 342.82" /culture_collection="CBS:342.82" /type_material="culture from type material of Dissoconium aciculare" /db_xref="taxon:1314786" /chromosome="Unknown" gene <1..>1296 /locus_tag="K489DRAFT_385887" /db_xref="GeneID:54363975" CDS 1..1296 /locus_tag="K489DRAFT_385887" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_033464261.1" /db_xref="GeneID:54363975" /db_xref="InterPro:IPR001260" /db_xref="JGIDB:Disac1_385887" /translation="
MNSIRPPLIDAALRSCIRSRPSPAFRNALQRRALSNGGRPPSGPMRPGDMGKNQIWAPKTRIAVGIVFIGTLIYSMVTGDKGSSLPPLPPDSTPRSGQQLDGPSIAERDSLSKRESGVTQSSPMRLRMEQFILKKQEEIVRALEAVDGKRFVADKWDRPNGGGGISCVLQDGNVFEKAGVNISVVYGTLPRAAIAKMRVNHKALDPDVDSLEFFAAGLSLVLHPHNPMAPTVHLNYRYFETANSDGSTNAWWFGGGTDLTPSYLFDEDAIHFHRTVKDACDAHDRAYYPRFKKWCDEYFYIPHRGESRGVGGMFFDDLDETEKDAESLFSFVQTSLSAFLPSYLPILQRRKDMPYTDREKQWQQLRRGRYVEFNLVHDRGTAFGLNTPGARVESILMSLPLTARWQYQHEPEKSSREERLMSVLRKPVEWV"
misc_feature 379..1290 /locus_tag="K489DRAFT_385887" /note="Coproporphyrinogen III oxidase; Region: Coprogen_oxidas; pfam01218" /db_xref="CDD:426132" ORIGIN
atgaattcaatacgaccgccactgatcgatgcggcgctgagatcctgcatacggtcgcgtccgtctcctgcattccgcaacgcgctccaacgaagagctctctcgaatggcggccgacctccgagcggcccaatgcggccaggtgatatgggaaagaatcaaatctgggccccgaagacgcgaatcgctgttggaattgttttcattggaacattgatctattccatggtgactggcgacaagggctcttcattaccacctcttccgccagactcaacgccccggtctgggcagcagctcgatgggccgagtatcgcagagcgtgattccctgagcaagcgtgagtccggtgtaacgcagtcctcaccaatgcgcctacgaatggaacagtttatcctgaagaagcaagaagagattgtgcgagcattggaagcggtggatggcaaacgctttgttgcagacaagtgggatagaccaaatggtggtggtggtatctcgtgtgtcctccaggacggcaatgtctttgaaaaagctggagtcaatatttcagttgtctatggcaccctccctcgcgccgctatcgccaagatgcgcgtcaaccacaaagcactcgatccggatgtcgacagcctggagttcttcgctgccggactctcgcttgtgctgcaccctcataatcccatggcgcctaccgttcatctgaactatcgctatttcgaaaccgcaaactcggacggctcgacgaatgcatggtggtttggtggtggaaccgacctcacaccctcgtacctctttgacgaagacgccatccacttccaccggacagtcaaggatgcctgcgacgcacacgaccgtgcctactatccacgattcaagaaatggtgcgacgagtacttctacatccctcatcgaggcgagagccgaggcgttggcggcatgttcttcgacgacctcgatgaaaccgagaaggacgccgagtcgctgttctcattcgtccagacgagcctgtcggcgttcttgccgtcatatctcccgattctgcaacgccgtaaagacatgccatacaccgaccgcgaaaagcaatggcaacagctgagacgaggtcgatatgtggagttcaaccttgtgcacgatcgcggcactgcttttggactcaacacgcctggtgctcgtgtcgagagcattctcatgagtttgccgctgaccgctcggtggcaataccagcatgagccggagaagagcagccgcgaggagcgtctgatgtctgttcttagaaaacctgtagaatgggtgtag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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