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2024-04-20 20:00:08, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_033508548            1591 bp    mRNA    linear   INV 16-APR-2020
DEFINITION  PREDICTED: Bombus vosnesenskii ras-related protein Rab-21
            (LOC117242126), mRNA.
ACCESSION   XM_033508548
VERSION     XM_033508548.1
DBLINK      BioProject: PRJNA623919
KEYWORDS    RefSeq.
SOURCE      Bombus vosnesenskii
  ORGANISM  Bombus vosnesenskii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
            Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_022884332.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Bombus vosnesenskii Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Bombus vosnesenskii"
                     /mol_type="mRNA"
                     /isolate="JDL3184/JDL3185"
                     /isolation_source="2 male haploid bees from laboratory
                     colony"
                     /db_xref="taxon:207650"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /country="USA: Oregon, Jackson County, Emigrant Lake"
                     /lat_lon="42.15236 N 122.62105 W"
                     /collection_date="26-Mar-2015"
                     /collected_by="Jonathan Koch"
                     /identified_by="James Strange"
     gene            1..1591
                     /gene="LOC117242126"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 16 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 194 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:117242126"
     CDS             155..832
                     /gene="LOC117242126"
                     /codon_start=1
                     /product="ras-related protein Rab-21"
                     /protein_id="XP_033364439.1"
                     /db_xref="GeneID:117242126"
                     /translation="
MQIMATPISSTGNGYNFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTVHGKKVNLAIWDTAGQEKFHALGPIYYRMSNGAIIVYDVTDYDTFQRVINWVTELRKMLGSGICLAIAGNKIDLEKDRRVCTEEAEEFANKTGAMHFHISAKLSENIEEMFFQLTLRMIEHADLMEQKSTLTRTSSTRRNVVVVEDEAEETEPTKSSCCSGSSHAS"
ORIGIN      
gtagagggggacaaagccgcatgaggggccccacccgtggatatcacatcgttatgatcgtcagtcgtcaatatactctataaattgttctatcaacgattattctgcgcaattacgactgtcatattgttttctaagtgtatatattagttatatgcaaattatggccactccaattagtagtactggtaatggttataatttcaaagtcgtgttactcggcgaaggatgtgtcggaaaaacctctgttgcattacgatacgttgaaaacaaatttaacgatagacatattagtacattacaggcttcttttttaaataaaaagttgactgtacacggaaaaaaagtaaacctggcgatatgggatacagctggtcaagaaaaatttcatgcattgggaccaatttattacagaatgtcaaatggtgccattatagtttacgatgttactgattacgatacatttcagagggtaataaattgggttacagagcttagaaaaatgttaggcagtggaatctgtttagcaattgctggaaataaaatagatcttgaaaaggatagacgtgtttgtaccgaagaagcagaagagtttgctaataaaactggagctatgcactttcatatttctgccaaactaagtgaaaatattgaagaaatgtttttccaattaacgctgcgcatgatagaacatgcagatctgatggaacaaaagtctacattaacaagaacaagtagtacacgtcgcaatgttgttgtagttgaagatgaagctgaagaaactgaaccaactaagagttcctgttgtagtggttcttcgcatgcatcttaattccaaatacctgtattgcaattggttctaattttaaacaagtcttatatataaaagtgtgtgtagatatacatgcatgtatgtatatgtacatacacatattgataaaccacatatatatatcacaaaatttttaatattttattttttaagaaacaaaaaataaaatagatataaactactaagcctaagtaatttaactgagtgtaaggtaagaaatattgattatattttgggagttgattttttatgtatttcgatattcaattacattgatagagcctcagttgactcatgaaccaaatatcttgttatccacatatatcatatagctagaagatttattacaattattagatgtatgtatttctgtcatataaatgtatatatatttaaatactattatgttttaataaaaagttaattaacatatacacgtatttaatacgatgttatttcttgggaatgttttgtaatttgtaattcagattaggttgtaattagttacaaagtaaagaatttactaattacatgcacagtatttgtgagtctaaagtacaatattctattctatcacaggtacatacatggattataaacatccacaaatcgatctatagtagcaacataatcgttaattcgttaaattattcatttcttcataacaattttaaataattaagtgtaaatatatagatgtaaatatacgaatggactacttatattcgtagataagaaagaaatttaaaacattagaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]