2024-04-20 20:00:08, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_033508548 1591 bp mRNA linear INV 16-APR-2020 DEFINITION PREDICTED: Bombus vosnesenskii ras-related protein Rab-21 (LOC117242126), mRNA. ACCESSION XM_033508548 VERSION XM_033508548.1 DBLINK BioProject: PRJNA623919 KEYWORDS RefSeq. SOURCE Bombus vosnesenskii ORGANISM Bombus vosnesenskii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022884332.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bombus vosnesenskii Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1591 /organism="Bombus vosnesenskii" /mol_type="mRNA" /isolate="JDL3184/JDL3185" /isolation_source="2 male haploid bees from laboratory colony" /db_xref="taxon:207650" /chromosome="Unknown" /sex="male" /tissue_type="muscle" /dev_stage="adult" /country="USA: Oregon, Jackson County, Emigrant Lake" /lat_lon="42.15236 N 122.62105 W" /collection_date="26-Mar-2015" /collected_by="Jonathan Koch" /identified_by="James Strange" gene 1..1591 /gene="LOC117242126" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns" /db_xref="GeneID:117242126" CDS 155..832 /gene="LOC117242126" /codon_start=1 /product="ras-related protein Rab-21" /protein_id="XP_033364439.1" /db_xref="GeneID:117242126" /translation="
MQIMATPISSTGNGYNFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTVHGKKVNLAIWDTAGQEKFHALGPIYYRMSNGAIIVYDVTDYDTFQRVINWVTELRKMLGSGICLAIAGNKIDLEKDRRVCTEEAEEFANKTGAMHFHISAKLSENIEEMFFQLTLRMIEHADLMEQKSTLTRTSSTRRNVVVVEDEAEETEPTKSSCCSGSSHAS"
ORIGIN
gtagagggggacaaagccgcatgaggggccccacccgtggatatcacatcgttatgatcgtcagtcgtcaatatactctataaattgttctatcaacgattattctgcgcaattacgactgtcatattgttttctaagtgtatatattagttatatgcaaattatggccactccaattagtagtactggtaatggttataatttcaaagtcgtgttactcggcgaaggatgtgtcggaaaaacctctgttgcattacgatacgttgaaaacaaatttaacgatagacatattagtacattacaggcttcttttttaaataaaaagttgactgtacacggaaaaaaagtaaacctggcgatatgggatacagctggtcaagaaaaatttcatgcattgggaccaatttattacagaatgtcaaatggtgccattatagtttacgatgttactgattacgatacatttcagagggtaataaattgggttacagagcttagaaaaatgttaggcagtggaatctgtttagcaattgctggaaataaaatagatcttgaaaaggatagacgtgtttgtaccgaagaagcagaagagtttgctaataaaactggagctatgcactttcatatttctgccaaactaagtgaaaatattgaagaaatgtttttccaattaacgctgcgcatgatagaacatgcagatctgatggaacaaaagtctacattaacaagaacaagtagtacacgtcgcaatgttgttgtagttgaagatgaagctgaagaaactgaaccaactaagagttcctgttgtagtggttcttcgcatgcatcttaattccaaatacctgtattgcaattggttctaattttaaacaagtcttatatataaaagtgtgtgtagatatacatgcatgtatgtatatgtacatacacatattgataaaccacatatatatatcacaaaatttttaatattttattttttaagaaacaaaaaataaaatagatataaactactaagcctaagtaatttaactgagtgtaaggtaagaaatattgattatattttgggagttgattttttatgtatttcgatattcaattacattgatagagcctcagttgactcatgaaccaaatatcttgttatccacatatatcatatagctagaagatttattacaattattagatgtatgtatttctgtcatataaatgtatatatatttaaatactattatgttttaataaaaagttaattaacatatacacgtatttaatacgatgttatttcttgggaatgttttgtaatttgtaattcagattaggttgtaattagttacaaagtaaagaatttactaattacatgcacagtatttgtgagtctaaagtacaatattctattctatcacaggtacatacatggattataaacatccacaaatcgatctatagtagcaacataatcgttaattcgttaaattattcatttcttcataacaattttaaataattaagtgtaaatatatagatgtaaatatacgaatggactacttatattcgtagataagaaagaaatttaaaacattagaaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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