LOCUS       XM_031903276            2801 bp    mRNA    linear   VRT 18-DEC-2019
DEFINITION  PREDICTED: Xenopus tropicalis testis and ovary specific PAZ domain
            containing 1 (topaz1), transcript variant X3, mRNA.
ACCESSION   XM_031903276
VERSION     XM_031903276.1
DBLINK      BioProject: PRJNA205740
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_030682.2) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Xenopus tropicalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2801
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /strain="Nigerian"
                     /db_xref="taxon:8364"
                     /chromosome="6"
                     /sex="female"
                     /tissue_type="liver and blood"
                     /dev_stage="adult"
                     /note="F17 inbred"
     gene            1..2801
                     /gene="topaz1"
                     /gene_synonym="c3orf77"
                     /note="testis and ovary specific PAZ domain containing 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 10 ESTs, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:100380130"
                     /db_xref="Xenbase:XB-GENE-5887135"
     CDS             149..2638
                     /gene="topaz1"
                     /gene_synonym="c3orf77"
                     /codon_start=1
                     /product="protein TOPAZ1 isoform X1"
                     /protein_id="XP_031759136.1"
                     /db_xref="GeneID:100380130"
                     /db_xref="Xenbase:XB-GENE-5887135"
                     /translation="

MFYTQLLFHCYRSSTHDVVPDDPELFGTPEDPYISPICNADNKENNKRNNLSALMCNLQEQESAHINESTNDASPEENVEERSTYFAKVITDLEVNDDPLIIHNTLEKNSEDFYDGGQFDFEAFRDLDTDKEIKYAEKNSSESGSSFEESLSKDTSPGSSHSNSRRWRRDPSHTYKPMHWMNDFRYSGKCMGLTDVITLDQKEQRNIDNLFYDFTPIQKTFLPIRYCKYFFNTFRGCIKPDCMYQHVPFQRDEKVCMEVIHKLVNENHTTLLKRAVWIFTAYYRMYMPGVHYDSNLLTKMLRALYVRQMWGDVFQLLETGANVKILPSSEMLIRLFENIGSTGLTAAVPSLVDVFCKLVEAGMMMKPEQINMLITTLNNLQATKNYISVILDIKTRIEMQLSEKNWLCNLDIAVAEVGHCKEKNDWKKLGTLYLNLRTGCENVTDLKKFSNCIVGALQKVPRNDKSEIPYCDFADTVYKDAQLSEIDKNILGRIGISIMYHYYRNKQSQKGKRVLRKLQEMQINFTVLKGLTGEESKATRCQVVNTAVEIFLNCEYLNGALGVLRESEWIINTQVWPCERMDVLKRHNLLCTIAQKTLNKNMFDVCLEVLQNLPGLQCSLTDVDVSQYSLLFNKLLSSCIENNTLGVSSTVIDFMIAKKIPLDFFLLRALITSLGRSCLWLRARELYKCAVLLGCYPPMEGNLYRKVLFIPSFLSEIEMLLSIEIFMVSNASSIQSPGGSHQTLQIILKRCEEERVPNKDYQRGKASYQDAVDRLIQASRLSTPRLFIKHLTVNNANEQVYILDYGSSLKWLHENMKWAGKVWLFQGKI"

     misc_feature    1397..1924
                     /gene="topaz1"
                     /gene_synonym="c3orf77"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:434113"
ORIGIN      

ttccatctaatgagtgaagtacaaggcaaggtgctaagaaagctgaaagcaacaatactttatccaagaaaagacagcagaaatgctgtggattcccttgtgtttcagagcataagaggaaaaaggagagtgcacagcagaaaactttatgttctacacacaactgttatttcactgttacagatccagcacacacgatgttgttccagatgatccagagctttttgggactcctgaagatccttacataagtccaatttgtaatgctgacaacaaagaaaataataaacggaataatctgagtgcattaatgtgtaaccttcaggaacaggagagcgcccatatcaatgaaagcacaaatgatgccagccctgaggaaaatgtagaagagagaagtacatattttgcaaaagtaatcactgatctagaagttaatgatgatcctctcatcatacataacactttggaaaagaacagtgaagatttttatgatggtggacagtttgattttgaggcgttcagagatcttgacacagataaagagattaaatatgctgaaaagaattcatctgaaagcggaagcagttttgaagagtccttgtccaaggatacttctccggggtcctctcattccaatagccgtcgttggagaagagatccctcacatacctataagcctatgcattggatgaatgatttcagatactctggaaaatgcatgggattgacggatgtgattactttggatcagaaagaacagaggaatattgataatctcttttacgattttacacctatacagaagacctttttgcccattagatactgcaaatatttttttaatactttccgtggatgcattaaaccagattgtatgtaccagcacgtaccattccaaagggatgaaaaggtgtgcatggaggtgattcacaaacttgtgaatgaaaatcacacaacattattaaaacgtgctgtttggatatttactgcctactacagaatgtatatgcctggtgttcattatgactcaaatctgctgaccaaaatgctccgtgccttgtatgttcgtcagatgtggggagatgtatttcagttgttggaaactggtgccaatgtcaaaatattgccctcctctgaaatgcttatcaggttatttgaaaatattggctctacgggattaacagcagctgtacctagtttagtggatgtattctgcaagcttgtggaggctggaatgatgatgaagccagagcaaatcaacatgttaataacaacactgaataatctccaggcaacaaaaaattatatcagtgtcattttagacataaaaacaagaattgaaatgcagctttcagaaaagaactggctgtgtaacttggatatagcagttgcagaagttgggcattgtaaagaaaaaaatgattggaagaaactaggaacattatatcttaatctgcgtacagggtgtgagaatgtgactgatcttaagaagttttctaattgcattgtcggggcgcttcagaaagtgccaaggaatgataaatctgaaattccatattgtgactttgcagacacagtgtacaaagacgcccaactaagtgaaattgacaaaaacattttgggaaggattggaatatccatcatgtatcactattacagaaataaacaatcgcaaaagggaaagagggtgctcagaaaacttcaggaaatgcagattaatttcacagtcctaaaaggactcacaggggaagagagtaaagctacgcgctgtcaagttgtgaacacagctgtagagatcttcttgaactgtgaatacttaaatggtgcactgggggttctacgagagtcagagtggatcattaacacacaagtgtggccctgtgaaagaatggatgtgctgaaacgacataacctgttgtgtacaattgcacagaaaacactgaataaaaacatgtttgatgtgtgtcttgaggtccttcagaatctgccaggactgcagtgctcattaacggatgtggatgtctctcagtacagcttgcttttcaacaaacttttgtcatcctgcatagaaaataatacacttggtgtatcctcaactgtgatagattttatgattgcaaaaaaaataccacttgactttttcttactgagagcactaatcacatccttgggacgaagctgtctatggctcagagcaagagaactttataaatgcgctgttttgttgggttgctacccgcccatggaaggaaatctgtatcgtaaagtgctcttcatcccctcattcctttctgagatagaaatgctgttatccattgaaattttcatggtgtcaaatgccagtagtattcagtcaccaggaggcagccatcagactctgcaaatcattctcaaaagatgtgaagaagagagagttccgaataaagattatcaaagaggtaaagctagctatcaagatgcagtggaccggctgattcaggcctctaggctatcaacaccaagattattcataaagcacctgactgtcaataatgccaatgaacaggtttatatccttgattacggcagctctctcaaatggttgcatgaaaacatgaaatgggctgggaaagtatggctttttcaggggaaaatataacttgatatcaggaggtttaactaagcaagtaatgaaaattttaaattaaagtgtctgtttaatttgttttattaatgtgtattttccacttttattgtccttatctgttgacaaaatggtttaagactgtacacaaaataaaatatatagtataaggaaaaca

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