LOCUS       XM_030869431            3660 bp    mRNA    linear   MAM 26-NOV-2024
DEFINITION  PREDICTED: Globicephala melas protein argonaute-4 (LOC115860046),
            mRNA.
ACCESSION   XM_030869431
VERSION     XM_030869431.3
DBLINK      BioProject: PRJNA1026603
KEYWORDS    RefSeq.
SOURCE      Globicephala melas (long-finned pilot whale)
  ORGANISM  Globicephala melas
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Odontoceti; Delphinidae; Globicephala.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083314) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Nov 26, 2024 this sequence version replaced XM_030869431.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963455315.2-RS_2024_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3660
                     /organism="Globicephala melas"
                     /mol_type="mRNA"
                     /db_xref="taxon:9731"
                     /chromosome="1"
     gene            1..3660
                     /gene="LOC115860046"
                     /note="protein argonaute-4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 44
                     Proteins"
                     /db_xref="GeneID:115860046"
     CDS             50..2635
                     /gene="LOC115860046"
                     /codon_start=1
                     /product="protein argonaute-4"
                     /protein_id="XP_030725291.1"
                     /db_xref="GeneID:115860046"
                     /translation="

MEALGPGPPTSLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNRDVVDTMVRHFKMQVFGDRQPGYDGKRNMYTAHPLPIGRERVDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTGRVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMTYVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQEISQELLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCADKTERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTQHTMYFA"

     misc_feature    125..514
                     /gene="LOC115860046"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:465134"
     misc_feature    545..697
                     /gene="LOC115860046"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:462567"
     misc_feature    698..1060
                     /gene="LOC115860046"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(854..856,899..901,941..943,953..955,1007..1009,
                     1028..1030,1034..1036)
                     /gene="LOC115860046"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1199..2506
                     /gene="LOC115860046"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1610..1612,1622..1624,1658..1669,1676..1678,
                     1700..1702,1709..1711,1721..1723,1733..1735)
                     /gene="LOC115860046"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1814..1816,1820..1822,2060..2062,2474..2476)
                     /gene="LOC115860046"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

cggagcgggaggcgccggggaccgcggcgaggcggcccccgccgccgccatggaggctctgggacccggacctccaaccagcctgtttcagccgcctcgtcgtcctggccttggaactgttggaaaaccaattcgactgttagccaatcattttcaggttcagattcctaaaatagatgtgtatcactatgacgtggatattaaaccagaaaaacggcctcgtagagtcaacagggacgtagtagatacaatggtgcggcacttcaagatgcaggtatttggtgatcggcagcctggctatgatggcaaaagaaacatgtacacagcacatccactgccaattggacgggagagggttgatatggaagtgacccttccaggtgagggtaaagaccagacctttaaagtgtctgttcagtgggtatcagttgtgagccttcagttgcttttagaagctttggccgggcacttgaatgaagtcccagatgactcagttcaagcacttgatgttatcacaagacaccttccctccatgaggtacactccagtgggtcgctcctttttctcacctcctgaaggttactatcaccctctgggagggggaagggaggtttggtttggctttcatcagtctgtgagacctgccatgtggaatatgatgctgaatattgatgtgtctgcaactgctttctaccgggctcagcctatcattgagttcatgtgtgaggttttagacattcagaacatcaatgaacagaccaaacccctaacagactcccagcgtgtcaagtttaccaaagaaatcagaggtcttaaagttgaggtgacccactgtggacagatgaaacgaaaatatcgagtgtgtaatgtgactaggcggccagccagtcatcagacttttcccttacagctagaaaatgggcaagcaatggaatgtacagtagctcaatattttaagcaaaagtatagtctgcaactgaaatacccccatcttccctgtctccaggtgggacaagaacaaaagcatacatacttgccacttgaggtttgtaatatagtggcaggacaacgatgtataaagaagctcacagacaatcagacttccacgatgatcaaagccacagcaagatctgctcctgacagacaagaagaaatcagtagactggtgaagagtaacagcatggtgggcggacctgatccatatcttaaagaatttggtattgttgtccacaatgaaatgactgagctcacaggcagggtacttccagcaccaatgctgcaatacggaggccggaataaaacggtagccacacccaaccagggtgtctgggacatgcgaggaaagcagttttatgctggcattgaaattaaagtttgggcagttgcttgttttgcgcctcagaaacaatgtagggaagatttactaaagagtttcactgaccagctccgtaaaatctctaaggatgcaggaatgcccatccagggtcagccatgtttttgcaagtatgcacaaggtgcagacagcgtggagcccatgtttaaacacctgaaaatgacatatgtgggcctacagctaatagtggttatcttgcctgggaagacgccagtatatgcggaggtgaaacgtgttggagataccctcctgggtatggctacacagtgtgtccaggtaaaaaatgtagtgaagacctcacctcaaaccctttccaacctttgcctgaagataaatgcaaagctcggaggaattaacaacgtgcttgtacctcatcaaaggccctcggtgttccagcagcctgtcatcttcctgggagcggatgtcacgcaccccccagcaggggatgggaagaagccttccattgctgctgtcgttggcagtatggacggccaccccagtcggtactgtgccactgtgcgggtgcagacgtcccgccaggagatctcccaggagctcctctatagtcaggaggtaatccaggaccttactaacatggttcgagagctgctgatccagttctacaaatccacacgcttcaaacccactcgaatcatctattaccgtggaggggtatccgagggacagatgaaacaggtagcttggccagaactaatagcaattcgaaaggcatgtattagtttggaagaagattaccggccaggaataacctatattgtggtgcagaaaagacatcacacacgactcttctgtgcagataaaacagagagggtggggaaaagtggcaatgtaccagcaggcactaccgtggatagcaccatcacacatccatctgagtttgacttttacctctgtagtcatgcaggaattcagggaaccagccgtccttcacattaccaggtcttgtgggatgacaactgcttcaccgcagatgagctccagttactaacttaccagctatgtcatacctatgtgcggtgcacacgctcagtctctattccagcccctgcctattatgcccgccttgtagcattcagagcaaggtatcatctggtggataaagatcatgacagtgcggaaggcagtcatgtgtcaggacagagcaatggccgagatcctcaggccttggctaaagctgtgcagatccaccatgatacccagcacacgatgtattttgcttgagagtctcagaaaaagaactcaaccagtttggcacaccatgcaggctcaaaatgtttcaaacgcctactgcctctagagagagccaagttgacttcaggtggtcctctaccagcaactcagaatagttgcactgaatctatacttcgcagcactgtctgatgcatcaacaaaattgagccatttttttaaagtaatagatactcattgattatcttttctgatgcactggactgaatttttacctcatcatgcaaaggctaatcagcctgaactttctaaaggactttatgagaaaggtttctatggactattttgctagctgtggtgttcaccgcatccctctagtcttacaagagaagcttattcctttttcctgtattcgtcgagtggggtatatgcataaatgggagagaaaaaccaatctacttcagttcagtgtaactatttaattgtgtgggtcaataggctttttaatggagatttctgacttcgccactgtaaatgcctttaacgagcattaatttttgaaagttttacagagttttattagttttactactttatgtattgatctctacagacttgtgctggtgcaagtacaggctgccaggcaattgcactatatttggctgcagattcagacaggcagttctcttatttggttgacttttgtgaatgtgtaacacatgtgatgcatgtcatggtgacagataacactgccatggtaaaaagtactcatatttccccctctttgaaaaaaattagcttttagtatttttcagagttttcaaaaatgcccattttatgctgctgtgtggtttgttagatctaaatgattttttaacttttctcatagcaagttaactttggcaataaacattttttaaagtccctcctcttcctccccctgacagtgtagttttttagatgagatttcggtatgatttttatcagctatttcttatagatcataatctgacaatttttgaaactggtcagaaaaggcatatatttccatgcctttt

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