2024-04-26 12:39:02, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_027432710 639 bp mRNA linear ROD 10-JUL-2020 DEFINITION PREDICTED: Cricetulus griseus claudin-34 (Claudin-18), mRNA. ACCESSION XM_027432710 VERSION XM_027432710.2 DBLINK BioProject: PRJNA498699 KEYWORDS RefSeq. SOURCE Cricetulus griseus (Chinese hamster) ORGANISM Cricetulus griseus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_048604.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 10, 2020 this sequence version replaced XM_027432710.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Cricetulus griseus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..639 /organism="Cricetulus griseus" /mol_type="mRNA" /strain="17A/GY" /isolation_source="Laboratory Animal" /db_xref="taxon:10029" /chromosome="X" /sex="female" /tissue_type="liver" /country="USA: Baltimore, MD" /lat_lon="39.299625 N 76.593518 W" /collection_date="2014-04-16" /note="pooled liver cells from 5 individuals" gene 1..639 /gene="Claudin-18" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 15% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:100755597" CDS 1..639 /gene="Claudin-18" /codon_start=1 /product="claudin-34" /protein_id="XP_027288511.1" /db_xref="GeneID:100755597" /translation="
MLLLSRSANCQVGGFALASIAWILCSVSTGLPQWRVWYLNESLYSEPSVAFIGMWRVCIYRQTIKVNNARECHDYTYHDNFVPWNIRIVQHLLLGSNILGLFGTLATIFALRNVYTRKVPKNATYNPFIISAILNIVASTFVLLAVLCNYFSVIHKAGIAFPPYFHMPLYPPNQRIGIANVVASLAALMFLGTGIIFLSYTSPVETQVYPDV"
ORIGIN
atgttgctgctcagcagaagtgccaactgtcaagttggcggatttgctttggcatccatagcatggatcctttgcagcgtctccacaggcctgccgcagtggcgagtgtggtacttgaatgaaagcctgtactctgagccttcggtagcctttataggaatgtggagagtttgcatttaccgccaaaccatcaaggtcaacaatgccagagagtgtcatgactacacctatcatgacaactttgttccttggaatattcgtatcgttcaacatctgttactgggctccaacattctcgggttatttgggacacttgccaccatttttgctcttcggaatgtgtacacacggaaagtacccaagaatgccacctacaatccgttcatcatttcggccattctcaacattgttgctagtaccttcgtcctccttgctgttttatgcaattatttctctgtcattcacaaagcaggaattgccttcccaccatatttccatatgcctttatatccacctaatcagagaattggaattgctaatgtagtggcaagtctagctgccctcatgtttttaggcactggcattattttcctttcgtacacttctcctgtggaaacccaagtatatcctgacgtttga
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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