LOCUS       XM_026557594             994 bp    mRNA    linear   PLN 02-OCT-2018
DEFINITION  PREDICTED: Papaver somniferum E3 ubiquitin-protein ligase
            AIRP2-like (LOC113309183), transcript variant X3, mRNA.
ACCESSION   XM_026557594
VERSION     XM_026557594.1
DBLINK      BioProject: PRJNA492326
KEYWORDS    RefSeq.
SOURCE      Papaver somniferum (opium poppy)
  ORGANISM  Papaver somniferum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Ranunculales; Papaveraceae;
            Papaveroideae; Papaver.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_039366.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Papaver somniferum Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Papaver somniferum"
                     /mol_type="mRNA"
                     /cultivar="HN1"
                     /db_xref="taxon:3469"
                     /chromosome="9"
                     /tissue_type="leaves"
                     /dev_stage="seedling"
                     /country="Australia"
     gene            1..994
                     /gene="LOC113309183"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 8 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:113309183"
     CDS             190..822
                     /gene="LOC113309183"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase AIRP2-like isoform
                     X2"
                     /protein_id="XP_026413379.1"
                     /db_xref="GeneID:113309183"
                     /translation="

MRLSYSPAARLFLFFIQWANFNLAGALGLLRIFIYKAYVDGKTTMCIQEKTASIREFYAVIFPSLLQLERGISDAEDQKQKEICATKYKKQVKTDTSKMSEIDLEREEECGICMEMNFKVVLPNCNHSLCMNCYRDWHARSKSCPFCRDSLKRVGSADLWIFTDSREIIDTSSMCKENLKRLFMYVDKLPAALPNPHVCISAYDSSRQLK"

     misc_feature    418..>705
                     /gene="LOC113309183"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]; Region:
                     COG5236"
                     /db_xref="CDD:227561"
     misc_feature    514..633
                     /gene="LOC113309183"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:450175"
     misc_feature    order(517..519,526..528,562..564,568..570,577..579,
                     586..588,619..621,628..630)
                     /gene="LOC113309183"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
ORIGIN      

agttttaatcggagaagacgtgctccttaagagaagtatattgtttaagctgctttaatggtttgtgtggtggggttgtagattctttatctacggagaaacagtattaatcagtacagtaaaccagtcacaccacttcaaatactggcttcattttatccgagagaatatgatggtgcttacattcagatgagattatcatacagtccagctgctcgcttattcctattttttattcagtgggccaatttcaacctcgctggtgcccttggattactaagaatcttcatttacaaggcttatgttgacggaaaaactaccatgtgcatacaagaaaaaacagctagtattagagaattttacgctgtcatctttccctctttattgcaacttgaaagaggaataagtgatgccgaggatcaaaagcagaaggaaatttgtgctaccaaatacaagaaacaggtcaagacggacacatccaaaatgtctgagattgatctagaaagagaagaggagtgtggtatttgcatggagatgaactttaaggttgtcttacccaattgcaaccactcgttgtgtatgaactgctatcgtgattggcatgcacggtctaaatcgtgcccattctgtcgtgacagtcttaaaagagtaggctcagcagacctttggatattcacggacagccgtgaaattatagacacatcttcaatgtgcaaagaaaatttaaagaggctattcatgtatgtagataagttacctgctgctcttccgaatcctcatgtatgtatttccgcttatgattcttctcgtcaactcaagtgagaaatggttgttttcaagtaattgcaagcaacaagttgtaaatagaaaatctttctgtacatagaaatgaaaattacgatgatttattgatttgctttggtactgatttatggaacaaacatttgtatatacaaattgtaacatctatattgatttgcttctctactctata

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