LOCUS       XM_025322718            4143 bp    mRNA    linear   PLN 26-JUN-2024
DEFINITION  Rhizophagus irregularis uncharacterized protein (OCT59_001906),
            mRNA.
ACCESSION   XM_025322718
VERSION     XM_025322718.2
DBLINK      BioProject: PRJNA1128271
            BioSample: SAMN31081226
KEYWORDS    RefSeq.
SOURCE      Rhizophagus irregularis (Glomus irregulare)
  ORGANISM  Rhizophagus irregularis
            Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota;
            Glomeromycotina; Glomeromycetes; Glomerales; Glomeraceae;
            Rhizophagus.
REFERENCE   1  (bases 1 to 4143)
  AUTHORS   Manley,B.F., Lotharukpong,J.S., Barrera-Redondo,J., Llewellyn,T.,
            Yildirir,G., Sperschneider,J., Corradi,N., Paszkowski,U.,
            Miska,E.A. and Dallaire,A.
  TITLE     A highly contiguous genome assembly reveals sources of genomic
            novelty in the symbiotic fungus Rhizophagus irregularis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4143)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 4143)
  AUTHORS   Manley,B.F., Lotharukpong,J.S., Barrera-Redondo,J., Llewellyn,T.,
            Yildirir,G., Sperschneider,J., Corradi,N., Paszkowski,U.,
            Miska,E.A. and Dallaire,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2022) Comparative Fungal Biology, Royal Botanic
            Gardens, Kew, Kew Road, Richmond TW9 3DS, United Kingdom
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_089438).
            
            On Jun 26, 2024 this sequence version replaced XM_025322718.1.
FEATURES             Location/Qualifiers
     source          1..4143
                     /organism="Rhizophagus irregularis"
                     /mol_type="mRNA"
                     /isolate="DAOM-197198"
                     /db_xref="taxon:588596"
                     /chromosome="10"
     gene            1..4143
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /db_xref="GeneID:36873017"
     CDS             297..3932
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_025165609.1"
                     /db_xref="GeneID:36873017"
                     /db_xref="InterPro:IPR001757"
                     /db_xref="InterPro:IPR006121"
                     /db_xref="InterPro:IPR006122"
                     /db_xref="InterPro:IPR008250"
                     /db_xref="InterPro:IPR017969"
                     /db_xref="InterPro:IPR018303"
                     /db_xref="InterPro:IPR023214"
                     /db_xref="InterPro:IPR023298"
                     /db_xref="InterPro:IPR023299"
                     /db_xref="InterPro:IPR027256"
                     /db_xref="InterPro:IPR036163"
                     /db_xref="InterPro:IPR036412"
                     /db_xref="InterPro:IPR044492"
                     /db_xref="PFAM:PF00122"
                     /db_xref="PFAM:PF00403"
                     /db_xref="PFAM:PF00702"
                     /translation="

MDKTDVHSRAVDIIEDLGDNAITDSKDSTAQAEVIPINGMTCQSCVKSITNAVSSLSGILNITVSLENKEASISFDSNKVSKSTIIETIENCGFDVPLTSDISMVDKVIPINGMTCQSCVRSITNAVSSLSGILNITVSLENNEASVSFDSNKITLSTIIETIEDCGFDVPLTSDISMVDKVIPINGMTCQSCVRSITNAVSLLPGIVNITVSLENNEASVSFDPNKITLSTIIETIENCGFDVPLASDIANINSTEFASFTNITLKQSQEEESYPLKVIKTHSFDQDNIQVCHIQVLGMTCASCVNSIEKNCCEAAGIISIKVSLLAERAIVEYDPDILDESSVAELIDSLGFKATPIKPKREGSVDLQIFGMRTSDHAQLIERELLKISGIINVSVNFSTAIATVQFDKESLGVRDIVDQIEKLDFNALIHDNSQKAQLESLARTREITEWRSAFYRSLIFAIPVFFISMVFPGFEWGRKLVHIELLRGIFSGDLVALLLTIPVQFGVGKRFYVSSYKALKHKTATMDVLIVIGTTSAFTFSCFSMIFALIVDGNEPSVFFDTSTMLITFVTFGRYLENLAKGKTSVALSKLMSLTPASTTILIKDSKTGEIIGEKKIPTELVQVGDVVKIFPGDKIPADGIVISGQSAVDESMVTGEVNPVNKRQSDSVIGGTVNGLGTFDMEVTRAGSDTALSQIVKLVEEAQISKAPIQEFADTVAGYFVPVVIGLGLLTFVGWMILAQILNPPPEIFEHNGSYFMVCLKLCISVIVVACPCALGLSTPTAVMVGTGVGAQNGILIKGGGPLETGHKITKIVFDKTGTLTKGQLDVAHYEIITNNLELTKETFFAIVGAAESSSEHPLGRSIVNYGKKLLDIETYDADVSDFEAVAGLGIKCKVILNTSYSAVTPLSATTNTTSKLYNVLIGNEKFLSLRNQIFIPSEAMNIKESQERLGRTAVLVAINNSFAGCIFLSDMVKPEAKIAVGALRCMGISVAMVTGDQLLTAEAIAAQCDITEIHAGVSPKGKTQIVQTLQYEGKGNVVAMVGDGINDSPALAAADLGIALCSGTDIAMEAADIVLMRGDITDVVAAIDLSKTIFKRIRLNFVWASLYNVLGIPLAMGLFIPWGFHLHPMMAGFAMAFSSVSVVCSSLLLRWWNKPTWVDNGKGGVERIVDNDGIINYLITLLKHGPNSSNYIGNSRYSRLAAEDNL"

     misc_feature    396..584
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; Region: CopZ; COG2608"
                     /db_xref="CDD:442020"
     misc_feature    606..806
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; Region: CopZ; COG2608"
                     /db_xref="CDD:442020"
     misc_feature    828..1028
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; Region: CopZ; COG2608"
                     /db_xref="CDD:442020"
     misc_feature    1176..1376
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; Region: CopZ; COG2608"
                     /db_xref="CDD:442020"
     misc_feature    1401..1586
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; Region: CopZ; COG2608"
                     /db_xref="CDD:442020"
     misc_feature    1665..3722
                     /locus_tag="OCT59_001906"
                     /old_locus_tag="GLOIN_2v1727982"
                     /note="P-type heavy metal-transporting ATPase, similar to
                     human copper-transporting ATPases, ATP7A and ATP7B;
                     Region: P-type_ATPase_Cu-like; cd02094"
                     /db_xref="CDD:319783"
     misc_feature    order(2619..2621,2625..2627,3630..3632)
                     /locus_tag="OCT59_001906"
                     /note="putative Cu binding site [ion binding]; other site"
                     /db_xref="CDD:319783"
     misc_feature    order(2751..2759,2964..2966,3072..3080,3171..3173,
                     3291..3299,3357..3359,3366..3368,3375..3377,3438..3440,
                     3447..3449)
                     /locus_tag="OCT59_001906"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:319783"
ORIGIN      

taaaagacggtcggcaaacgacattaatgggatttacaggaaataaatccggataaaaatttcggcaattaaacaaattgcatgacgcatctgatcttggttgcgaatacattagataggtctaaataattccgaactttctttctgtttttatattttccaactaaagcatccacttttacaaaaaagtaaaataaaaataataaaagcctcctttgccacaattttttatataaaacaaaaaaaaaaacattatttattgaaagattgaccaaatttaagaaaactcacgtaaaatggataaaactgacgttcattctcgagcagttgacataatagaagatcttggtgataatgctattactgatagcaaggattcaacagctcaagctgaagtgattccaattaatggtatgacatgtcagtcttgtgtaaagtcgataactaatgcagtttcttcattatctggaattttgaatattactgtgagtttagaaaataaagaagcatcaatttcttttgattcaaataaagtatcaaaatcaacaatcattgaaacaattgaaaattgtggatttgatgttcctttaacatcagatatatcaatggtagataaagtaattccaattaatggtatgacatgtcagtcttgtgttaggtcgataactaatgctgtttcttcattatctggaattttgaatattactgtgagtttagaaaataatgaagcatcagtatcttttgattcaaataaaataacattatcaacaattattgaaacaattgaagattgtggatttgatgttcctttaacatcagatatatcaatggtagataaagtaattccaattaatggtatgacatgccagtcttgcgtaaggtcgataactaacgctgtttctctattacctggaattgtaaatattactgtgagtttagaaaataatgaagcatcagtttcttttgatccaaataaaataacattatcaacaattattgaaacaattgaaaattgtggatttgatgttcctttagcatcagatatagcaaatattaattcaacagaatttgcttcattcacaaatattactttgaaacaatcacaggaagaagaatcatatcctcttaaagttattaagacacatagttttgatcaagataatattcaagtttgtcatatacaagttcttgggatgacttgtgcgtcttgcgtgaatagcatagaaaaaaattgttgtgaagctgcaggaataatttcaattaaagtgtctttacttgctgaaagagcaatagtggaatatgatcctgatattttagatgagagttctgtagctgaattgattgatagcttaggatttaaagctactccaattaagccaaagcgtgaaggttcagtcgatcttcaaatttttggaatgcgaacctccgatcatgcccaattaattgaacgagaattacttaaaatttctggaataataaacgtttcagttaatttttccacggcaatagcaacggttcaattcgataaggaatccttaggagttcgggatatcgtagaccaaattgaaaaacttgattttaatgctcttatccatgataatagtcaaaaagctcagttagaatctttagctcgtacaagagaaattacagaatggcgttcagcattctatcgatcgcttattttcgctattcctgttttctttatttctatggtcttcccaggatttgaatggggaaggaaattagttcatattgaattacttcgtgggatatttagtggtgatttagtcgctcttttattaacaattcctgttcaatttggtgttggaaaacgattttatgtttcatcatacaaagctctcaaacacaaaactgctactatggacgttttaatagttattggaactacgtccgcgtttactttttcatgcttttccatgatctttgcattaattgtagatggaaatgaaccatcggtatttttcgatacatcgaccatgttaattacttttgttacgtttggaagatatcttgagaatttagcaaaaggaaaaacctcagttgcattatcgaaactcatgtcactcacgcctgcttctactaccatattaattaaagattccaaaacaggtgaaataattggagagaaaaaaattcctacagaattagtacaagttggcgatgtagtaaaaatttttcctggggataaaattccggcagatggaattgttatatcaggtcaatcagctgtagatgaatcaatggtaactggagaagtcaatcctgtaaacaaacgacaaagtgattcggtaattggtggcactgttaatggattgggaacttttgatatggaggtcacacgtgctggaagcgatacagctttatctcaaattgtcaaacttgttgaagaagctcaaatttccaaagctccgattcaagaatttgctgataccgttgccggttattttgtacccgtggtcattgggttaggcctacttacattcgtagggtggatgattcttgcacaaattttaaatcctcctccggaaatttttgaacataatggaagttatttcatggtttgtcttaaattatgtatttctgttattgtggttgcatgtccttgtgcattaggtcttagtactcctacggctgttatggtcggaactggagttggagcacaaaatggaatattaatcaaaggtggtggtccgcttgaaacaggacataaaattacaaaaatcgtttttgataagactggtacacttacaaagggtcaattagacgttgctcattatgagattataacgaacaatttagaattgacaaaggaaacattttttgcaattgttggagcagctgaatcttctagcgaacatcctcttggaagatctatcgtaaattatggaaagaaattgttagatattgaaacatatgatgctgatgtttcagattttgaagctgttgctggattaggtataaaatgtaaagtgattttaaatacatcatattctgctgttacacctctatcggcaacaacaaatacaacatcaaaattatataatgtcttgatcggtaatgagaaatttctctcacttcgaaatcaaatatttattccaagcgaagcaatgaatatcaaagaatcacaagaacgtcttggaaggactgcagttttagtagccattaacaattcatttgctggttgtatatttttatctgacatggttaaacctgaagctaaaatagcagttggggctttacgttgtatgggaatttcagttgcaatggttacaggtgatcaattgcttactgccgaagcaattgcagcgcaatgtgatattactgaaattcatgctggtgtatcaccaaaaggtaaaacacaaattgttcaaacgcttcagtatgaaggtaaaggaaatgtagtggcaatggttggggatggtataaatgattcaccagcattagcagcagcagatttaggtattgcgctttgttcgggtacagatattgcaatggaagcagcagatattgtattaatgagaggggatataacagatgttgtagcggctattgacttatcaaaaacaatatttaaacgtattaggttaaattttgtatgggcaagtttatataatgtattgggcattcctctagctatggggttatttatcccgtggggatttcatttacatccaatgatggctggatttgcaatggctttttcgagcgtgagcgttgtttgttctagtttattattaagatggtggaataaacctacttgggttgataatggtaaaggtggtgtagaaagaattgtagataatgatggtataatcaattatttaataactttattaaaacatggtcctaatagtagtaattatattggtaatagtagatatagtagattagcagccgaagataacttataaatcatatttaatttattggttttggcattagaaataataatcctggtcggtaatttggtattttaatgatttgttcgcattgtacattgtttttatttaatttatttaattttcattttagtattagaataaatataataaataaaaaaaccaacattctgatcacatgatataattttcgatgcacgtctaagagcatcatcactcttaa

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