LOCUS       XM_025152777            3793 bp    mRNA    linear   VRT 01-MAR-2022
DEFINITION  PREDICTED: Gallus gallus ST6 N-acetylgalactosaminide
            alpha-2,6-sialyltransferase 5 (ST6GALNAC5), transcript variant X4,
            mRNA.
ACCESSION   XM_025152777
VERSION     XM_025152777.2
DBLINK      BioProject: PRJNA698609
KEYWORDS    RefSeq.
SOURCE      Gallus gallus (chicken)
  ORGANISM  Gallus gallus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
            Phasianidae; Phasianinae; Gallus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_052539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 10, 2021 this sequence version replaced XM_025152777.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Gallus gallus Annotation Release 106
            Annotation Version          :: 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3793
                     /organism="Gallus gallus"
                     /mol_type="mRNA"
                     /isolate="bGalGal1"
                     /db_xref="taxon:9031"
                     /chromosome="8"
                     /sex="female"
                     /tissue_type="blood"
                     /country="USA: Fayetteville"
                     /lat_lon="36.0822 N 94.1719 W"
                     /collection_date="20-May-2019"
                     /collected_by="Nick Anthony"
     gene            1..3793
                     /gene="ST6GALNAC5"
                     /gene_synonym="SIAT7E"
                     /note="ST6 N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     mRNAs, 4 ESTs, 99 long SRA reads, 2 Proteins, and 94%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="CGNC:6857"
                     /db_xref="GeneID:407778"
     misc_feature    1
                     /gene="ST6GALNAC5"
                     /gene_synonym="SIAT7E"
                     /experiment="COORDINATES: cap analysis [ECO:0007248]"
                     /note="transcription start site"
     CDS             372..1223
                     /gene="ST6GALNAC5"
                     /gene_synonym="SIAT7E"
                     /codon_start=1
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 5 isoform X4"
                     /protein_id="XP_025008545.2"
                     /db_xref="GeneID:407778"
                     /db_xref="CGNC:6857"
                     /translation="

MLYVFQKNLGSDLCACQWFESKQQPLKMHCKSCALVTSSGHLLGSKQGDRIDETECVIRMNDAPTRGYGQDVGNKTSLRVIAHSSIQRILRNRNELLNMSHGAVFIFWGPSSYMRRDGKGLVYNNLQLMNQILPQLKAYMISRHKMLQFDDLFKRETGKDRKISNTWLSTGWFTMTIALELCDRINVYGMVPPDFCSWQRRISSVPVLKRLCPCHHWILIIFQYLIIIMNLWDPMNAQCTFHTSGDERAAIIGSSQRNECLRTGRGHSTFTSSNQTGNQNHLL"

     misc_feature    435..953
                     /gene="ST6GALNAC5"
                     /gene_synonym="SIAT7E"
                     /note="Glycosyltransferase family 29 (sialyltransferase);
                     Region: Glyco_transf_29; pfam00777"
                     /db_xref="CDD:425864"
     polyA_site      3793
                     /gene="ST6GALNAC5"
                     /gene_synonym="SIAT7E"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

agggcagcaggaggggataaggtggaggttgtggcggtgaggggttgtatccctgctctagcagactctggtgtctgacttgggctctgtggtgttcgagacctgttagaggtgcatttatggattgcagggcagcaagagttattctggagatgactttccagcaatttctaccttagagctgtgtacagagtttgcagtctgaggctccccattgccctgggtggttttctgcaagtcccggcatgcaggacatggcacccttacaagacttgttcctcgggctggtgtgccatgcgtgctgtcagtccctctgctgactttttcctaatgacctggcttacattggaaccttctttaagaggaaaaaaatgctatacgtctttcagaagaacctcggaagtgatctttgtgcatgtcagtggtttgaaagcaagcaacagcctttaaaaatgcactgcaagagctgtgcattggtaaccagttctggacaccttctgggaagtaaacaaggtgacagaatcgacgagacggagtgcgtaatacgaatgaatgatgcacctactcgaggttatggacaggatgttgggaacaaaacaagccttcgagtcattgcacactccagcattcagaggattttgcgaaatcgcaatgaactcttaaatatgagccacggtgctgtgttcatcttctggggtcctagcagctacatgaggagagatggtaaaggcttggtgtacaacaacctgcagctgatgaatcagatactgcctcaattaaaagcatacatgatttctcgccacaagatgcttcaatttgatgacctttttaaacgggaaactgggaaagacaggaagatatccaacacttggcttagcacgggctggttcacaatgactatcgccttagagctgtgtgacaggataaatgtttatggcatggtgccaccggatttctgcagttggcaaagacgcatttcttcagttcctgttctgaaacggttatgtccctgtcatcactggatcctaatcatctttcagtaccttatcattattatgaacctttgggacccgatgaatgcacaatgtacatttcacacgagcggggacgaaagggcagccatcatcggttcatcacagagaaacgagtgtttgagaactgggcgcggacattcaacattcacttcttccaaccagactggaaaccagaaccacttactgtaaatcaccccgagatgaaagcagcagtctgagggatgaatgcaaaagactgcaaccgcaatcaccgactgtatcagccatcagggggttggaccttctgggacagcaaggcaactgacagcaaaagggtaacgggatttgcagctgataactgcaacaagtcaggaagttgcgatggaggggtatatagagagcactttctgttgaactgtgtgttaatccgctatatcgcctttctggccatctgacttcctgtacgtgtgtgtgatttgtgaaaagcaactcggtatcattacaggatgggtaattcattatggttttttaaagtacagcaccactgacttttcatagtgaaaactgacggtatttatttaatggaggtttttatgcaacctaggccagtatttttctaattcacagttctgtggtcgttgatctttcataatctttcaaatccaaaattaatactgctgatggtttgaaaggcctagctttttatttataaaatttatttgaaaaatatgattccgtatagcatgtaattaatactcgatcaggaaacattgcatttcttttaaaaactttgggctcccttccagcctaaagcctttaacagcaagaatggtcccatgtgcagatccagataacttcacattctggcatctcgtgttaatatgaaaacagtagtgaaaattctgtttgatattaatgtgaatttgctgctgtgctatcaaactgctctattttaatccagaggtggggaaaaggaaggcggagttcatcccaaagaagtcagtttaccgcaccatgttctcgctgcagaagagaccaactacagctgaggggttgtatttcgttttgcctgttgtggtcctgcaggaggctgaaggagcagccttcctgaggcaacaacctgcagaccaggcaacaacatgaccaaatttctaaaaccaggaagctgtgttacagtgtgctgcagtaccaggcaaaaagatggtaaggtcgcacctgtatgatccatgccttccactattccaagaccacaactgatctcagagatcctggactgcattgaagctgggatgtggaaggatttgtgtccccctgagagcagcaaagttacacctggcagaatctgtgtgacagacacaagcctggcaaacacaaggagtggacgatgccagttctgtatgtggaagcacacactgagtcttactgggttacatttggcttgtgaataaaggaaatttcatttgtgctattatttttccttttgcctcacaaatataaaatctctaacttgtcttgttgattatgttgaagaaattattgcatgaaacatactgacaaaggggtctctcattggacaaatagtaaagctagaacaaaggcactgaagcctctaaacccaatgagctcaacctcagaggcaatatatggaattgggaccaaactcagtatcatttgaactcagttatgacatgttatggcttcctctttccaaaatgtcatagcaacagctgcagctgcccaacagatgccccagttctctagggacaaattgcagtgaagcgccttgtcaggtagaacagtgttgcctctgtaatgctgtgtagacataagagaaccactctccttcatagaatggcttgggttggaagggtcctcaaggatcatcaagctccaacccccccactgcaggcagggccaccaacctctgcatttaatactagaccaggctgcccagggctccatccaacctggccttgaacacctccagggatggggcatccacagcctctctgggcagcctgttccagcacctcaccactctgtaaagaacttccccctgatatccaacctaaatctttcttccttcaacttaaaaccatttcccccttgttctgccagtatgtaccctttcaaagagttgactcccctcctgtttataggctccctttaggtactgaaaggctgccgtgaggtcaccctgcagccttctcttctccaggctgaacaagcccagctgcctcagcctgtcctcataggggaggtgctcctgacctctgaccatctttgtggcccttttctggaccctctccaacagctcccttccttgctgcagcactccccccatcacaaggtaagaaagaaagtacaacctattttgccttggaacttttcttttagtgctcttcctggtatacatcattcaccacacaaaattaatacaaatctctgcttctgccaattacttgtaacccatctctcgccagctgatctctaactctccctcattcagtgattatgttttatcccttccacttcatttcacaaaattctacaaagagcagaatgggttctgaactgatagtaatttgcacatccctttcagcatgtgtactggggcatgtatccaacgtgtattacttgaattgatgaactccatcaaattgatgtacagatcatttctaatatgactgcaagagatggtgcagatctcagtaggtgctgtgatgccacaacctgttattttattagtgatataataaaaagatcttatcataaagtaa

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