2025-04-02 18:15:21, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_024808279 1101 bp mRNA linear PLN 26-APR-2018 DEFINITION [Candida] sorbophila Protein disulfide-isomerase erp38 (B9G98_01721), partial mRNA. ACCESSION XM_024808279 VERSION XM_024808279.1 DBLINK BioProject: PRJNA453587 BioSample: SAMN06765614 KEYWORDS RefSeq. SOURCE Wickerhamiella sorbophila ORGANISM Wickerhamiella sorbophila Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Dipodascomycetes; Dipodascales; Trichomonascaceae; Wickerhamiella. REFERENCE 1 (bases 1 to 1101) AUTHORS Ahn,J.O. TITLE Genome sequencing of [Candida] sorbophila JOURNAL Unpublished REFERENCE 2 (bases 1 to 1101) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-APR-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1101) AUTHORS Ahn,J.O. TITLE Direct Submission JOURNAL Submitted (19-APR-2017) Biotechnology Process Engineering Center, KRIBB, 30 Yeongudanji-ro, Ochang-eup Cheongwon-gu, Cheong-joo 363-883, South Korea COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_020193984). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1101 /organism="Wickerhamiella sorbophila" /mol_type="mRNA" /strain="DS02" /isolation_source="Industrial water" /db_xref="taxon:45607" /chromosome="Unknown" /geo_loc_name="South Korea" /collection_date="Jan-2015" gene <1..>1101 /locus_tag="B9G98_01721" /db_xref="GeneID:36515470" CDS 1..1101 /locus_tag="B9G98_01721" /note="erp38_0" /codon_start=1 /product="Protein disulfide-isomerase erp38" /protein_id="XP_024664047.1" /db_xref="GeneID:36515470" /db_xref="GO:0005783" /db_xref="GO:0045454" /db_xref="InterPro:IPR011679" /db_xref="InterPro:IPR013766" /db_xref="PFAM:PF00085" /db_xref="PFAM:PF07749" /translation="
MQLLKWLAVLPLSAAAVIEATDVDLDKLMSNGVPTILDIYASWCGHCKTFSPVFDEVAALYEHAKDKIQFVKIDGDIHRKAAKKHDVKFFPTIKFVDGDKQEDINSRDAKSLHKLIKSKTGAEPQKAEPKQAKEEKKEKKVRTPKSKIVSLTDDTFEDAVDDKDALVAFTTTWCGYCKRLKPVWDELAALYEQDDEIVVAEVDCTDSEPVANLMETFHVEGYPTIVYFPKDGSTPRPYTSGRDIKALVKFMKDEGISFRNADGQLDDHAGVVDALTEQAQSLIGASQEAYDGFIMAIETSGTPFADVYTRVAKKVFEKGASYVSEESARIEKLLATKLAPKKADKLRVKLNVLRTFVAKDTGKDEL"
misc_feature 58..>162 /locus_tag="B9G98_01721" /note="The thioredoxin (TRX)-like superfamily is a large, diverse group of proteins containing a TRX fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox...; Region: Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; cl00388" /db_xref="CDD:469754" misc_feature <142..765 /locus_tag="B9G98_01721" /note="protein disulfide isomerase, eukaryotic; Region: ER_PDI_fam; TIGR01130" /db_xref="CDD:273457" misc_feature 442..750 /locus_tag="B9G98_01721" /note="The thioredoxin (TRX)-like superfamily is a large, diverse group of proteins containing a TRX fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox...; Region: Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; cl00388" /db_xref="CDD:469754" misc_feature 808..1068 /locus_tag="B9G98_01721" /note="Endoplasmic reticulum protein ERp29, C-terminal domain; Region: ERp29; pfam07749" /db_xref="CDD:462253" ORIGIN
atgcagttgttaaagtggttggcagttttgccgcttagtgcggccgcagttattgaggccaccgacgtggatctcgacaaattaatgtccaatggtgtccctaccattctggacatctacgcttcgtggtgcggccactgcaagaccttctccccagttttcgatgaggtggcagctctgtacgagcacgccaaggacaagatccaattcgttaaaatcgacggcgacatccaccgcaaggcggccaagaagcacgacgtcaagttcttccctacgatcaagtttgtggacggtgacaagcaggaggacatcaattcgcgggacgccaagtcgctgcacaagctgatcaagtccaagacgggcgctgagccgcaaaaggccgaaccgaagcaggccaaggaagaaaagaaggaaaagaaggtcagaacacccaagtccaagattgtttctttgactgacgacacgtttgaggacgccgtcgacgacaaggacgccctggttgcattcaccactacctggtgcggctactgcaagcggctgaagcccgtgtgggacgagctggctgctctttacgagcaggatgatgaaattgtcgttgcagaggtcgactgcaccgactccgagccggtggccaacctcatggagaccttccatgtcgagggctaccccaccattgtgtacttccccaaggacggatccaccccccgtccctacacttcgggccgcgatatcaaggctctcgtcaagttcatgaaggacgagggtatttctttccgcaacgctgacggccagcttgacgaccacgccggcgtcgtggatgctttgactgagcaggcccagagcctgattggcgcttcccaggaggcctacgacggcttcattatggccattgagaccagcggcactccctttgccgacgtttacacccgcgtcgccaagaaggtctttgaaaagggcgccagctacgtctccgaggagtcggcccgcatcgagaagctgctggccactaagctcgctcccaaaaaggcagacaagctccgggtcaagctcaacgtccttcgcacttttgtcgcaaaggacaccggcaaggacgagctctaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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