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2025-04-02 18:15:21, GGRNA.v2 : RefSeq release 228 (Jan, 2025)

LOCUS       XM_024808279            1101 bp    mRNA    linear   PLN 26-APR-2018
DEFINITION  [Candida] sorbophila Protein disulfide-isomerase erp38
            (B9G98_01721), partial mRNA.
ACCESSION   XM_024808279
VERSION     XM_024808279.1
DBLINK      BioProject: PRJNA453587
            BioSample: SAMN06765614
KEYWORDS    RefSeq.
SOURCE      Wickerhamiella sorbophila
  ORGANISM  Wickerhamiella sorbophila
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Dipodascomycetes; Dipodascales; Trichomonascaceae; Wickerhamiella.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ahn,J.O.
  TITLE     Genome sequencing of [Candida] sorbophila
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1101)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-APR-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1101)
  AUTHORS   Ahn,J.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2017) Biotechnology Process Engineering Center,
            KRIBB, 30 Yeongudanji-ro, Ochang-eup Cheongwon-gu, Cheong-joo
            363-883, South Korea
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_020193984).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Wickerhamiella sorbophila"
                     /mol_type="mRNA"
                     /strain="DS02"
                     /isolation_source="Industrial water"
                     /db_xref="taxon:45607"
                     /chromosome="Unknown"
                     /geo_loc_name="South Korea"
                     /collection_date="Jan-2015"
     gene            <1..>1101
                     /locus_tag="B9G98_01721"
                     /db_xref="GeneID:36515470"
     CDS             1..1101
                     /locus_tag="B9G98_01721"
                     /note="erp38_0"
                     /codon_start=1
                     /product="Protein disulfide-isomerase erp38"
                     /protein_id="XP_024664047.1"
                     /db_xref="GeneID:36515470"
                     /db_xref="GO:0005783"
                     /db_xref="GO:0045454"
                     /db_xref="InterPro:IPR011679"
                     /db_xref="InterPro:IPR013766"
                     /db_xref="PFAM:PF00085"
                     /db_xref="PFAM:PF07749"
                     /translation="
MQLLKWLAVLPLSAAAVIEATDVDLDKLMSNGVPTILDIYASWCGHCKTFSPVFDEVAALYEHAKDKIQFVKIDGDIHRKAAKKHDVKFFPTIKFVDGDKQEDINSRDAKSLHKLIKSKTGAEPQKAEPKQAKEEKKEKKVRTPKSKIVSLTDDTFEDAVDDKDALVAFTTTWCGYCKRLKPVWDELAALYEQDDEIVVAEVDCTDSEPVANLMETFHVEGYPTIVYFPKDGSTPRPYTSGRDIKALVKFMKDEGISFRNADGQLDDHAGVVDALTEQAQSLIGASQEAYDGFIMAIETSGTPFADVYTRVAKKVFEKGASYVSEESARIEKLLATKLAPKKADKLRVKLNVLRTFVAKDTGKDEL"
     misc_feature    58..>162
                     /locus_tag="B9G98_01721"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; Region:
                     Protein Disulfide Oxidoreductases and Other Proteins with
                     a Thioredoxin fold; cl00388"
                     /db_xref="CDD:469754"
     misc_feature    <142..765
                     /locus_tag="B9G98_01721"
                     /note="protein disulfide isomerase, eukaryotic; Region:
                     ER_PDI_fam; TIGR01130"
                     /db_xref="CDD:273457"
     misc_feature    442..750
                     /locus_tag="B9G98_01721"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; Region:
                     Protein Disulfide Oxidoreductases and Other Proteins with
                     a Thioredoxin fold; cl00388"
                     /db_xref="CDD:469754"
     misc_feature    808..1068
                     /locus_tag="B9G98_01721"
                     /note="Endoplasmic reticulum protein ERp29, C-terminal
                     domain; Region: ERp29; pfam07749"
                     /db_xref="CDD:462253"
ORIGIN      
atgcagttgttaaagtggttggcagttttgccgcttagtgcggccgcagttattgaggccaccgacgtggatctcgacaaattaatgtccaatggtgtccctaccattctggacatctacgcttcgtggtgcggccactgcaagaccttctccccagttttcgatgaggtggcagctctgtacgagcacgccaaggacaagatccaattcgttaaaatcgacggcgacatccaccgcaaggcggccaagaagcacgacgtcaagttcttccctacgatcaagtttgtggacggtgacaagcaggaggacatcaattcgcgggacgccaagtcgctgcacaagctgatcaagtccaagacgggcgctgagccgcaaaaggccgaaccgaagcaggccaaggaagaaaagaaggaaaagaaggtcagaacacccaagtccaagattgtttctttgactgacgacacgtttgaggacgccgtcgacgacaaggacgccctggttgcattcaccactacctggtgcggctactgcaagcggctgaagcccgtgtgggacgagctggctgctctttacgagcaggatgatgaaattgtcgttgcagaggtcgactgcaccgactccgagccggtggccaacctcatggagaccttccatgtcgagggctaccccaccattgtgtacttccccaaggacggatccaccccccgtccctacacttcgggccgcgatatcaaggctctcgtcaagttcatgaaggacgagggtatttctttccgcaacgctgacggccagcttgacgaccacgccggcgtcgtggatgctttgactgagcaggcccagagcctgattggcgcttcccaggaggcctacgacggcttcattatggccattgagaccagcggcactccctttgccgacgtttacacccgcgtcgccaagaaggtctttgaaaagggcgccagctacgtctccgaggagtcggcccgcatcgagaagctgctggccactaagctcgctcccaaaaaggcagacaagctccgggtcaagctcaacgtccttcgcacttttgtcgcaaaggacaccggcaaggacgagctctaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]