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2024-03-28 20:30:40, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_024166711             456 bp    mRNA    linear   PLN 26-FEB-2018
DEFINITION  PREDICTED: Morus notabilis uncharacterized LOC21408890
            (LOC21408890), mRNA.
ACCESSION   XM_024166711
VERSION     XM_024166711.1
DBLINK      BioProject: PRJNA263939
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Morus notabilis
  ORGANISM  Morus notabilis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_010361515.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Morus notabilis Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Morus notabilis"
                     /mol_type="mRNA"
                     /db_xref="taxon:981085"
                     /chromosome="Unknown"
                     /country="China"
                     /authority="Morus notabilis C.K.Schneid."
     gene            1..456
                     /gene="LOC21408890"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:21408890"
     CDS             1..456
                     /gene="LOC21408890"
                     /codon_start=1
                     /product="uncharacterized protein LOC21408890"
                     /protein_id="XP_024022479.1"
                     /db_xref="GeneID:21408890"
                     /translation="
MKDNKLQESQKWLEDHSKGVIGSELVTSTLEGLQVVASHEGFFRCHFLVPSSLLDQRGNWHIGAIATLIDSVGAATAHSLFGPIRASVDFIISYFSTAKFQEEIEIEAKAVRGQGKLVGFMVEVKRKGSGELIAIGKQWMASKGQEKSSRL"
     misc_feature    94..423
                     /gene="LOC21408890"
                     /note="PaaI_thioesterase is a tetrameric acyl-CoA
                     thioesterase with a hot dog fold and one of several
                     proteins responsible for phenylacetic acid (PA)
                     degradation in bacteria. Although orthologs of PaaI exist
                     in archaea and eukaryotes, their function has not...;
                     Region: PaaI_thioesterase; cd03443"
                     /db_xref="CDD:239527"
     misc_feature    order(178..180,259..261,280..291)
                     /gene="LOC21408890"
                     /note="CoenzymeA binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:239527"
     misc_feature    order(181..183,187..189,196..198,262..276,280..282)
                     /gene="LOC21408890"
                     /note="subunit interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:239527"
     misc_feature    order(184..186,208..213,220..225,259..261)
                     /gene="LOC21408890"
                     /note="PHB binding site [active]"
                     /db_xref="CDD:239527"
ORIGIN      
atgaaagacaacaaacttcaggagtctcaaaaatggcttgaagatcattcaaagggcgtcataggaagtgaattggtgacttcaactttggagggccttcaggtggttgcatcccatgaaggctttttccgctgtcacttccttgtaccgagtagccttttggatcaacgtggaaactggcacatcggagcgatagccacgttgatcgatagcgtaggcgccgccacggcacactcgttgtttggtcccatcagagcatccgttgactttatcatctcatacttctcaacggctaagtttcaagaagagattgagatagaggccaaggctgtaagaggacaaggaaagcttgtagggtttatggtggaagtgaaaagaaaaggtagtggagaattgattgccattggtaagcaatggatggcctcaaaaggtcaagagaaaagtagtaggctttga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]