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Previous release (v1)
2025-12-13 01:40:27, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_023483453 433 bp mRNA linear INV 16-OCT-2023
DEFINITION PREDICTED: Eurytemora carolleeae BBSome-interacting protein 1-like
(LOC111709665), mRNA.
ACCESSION XM_023483453
VERSION XM_023483453.1
DBLINK BioProject: PRJNA423276
KEYWORDS RefSeq.
SOURCE Eurytemora carolleeae
ORGANISM Eurytemora carolleeae
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea;
Multicrustacea; Hexanauplia; Copepoda; Calanoida; Temoridae;
Eurytemora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_019396880.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_000591075.1-RS_2023_10
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 10/05/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..433
/organism="Eurytemora carolleeae"
/mol_type="mRNA"
/db_xref="taxon:1294199"
/chromosome="Unknown"
gene 1..433
/gene="LOC111709665"
/note="BBSome-interacting protein 1-like; Derived by
automated computational analysis using gene prediction
method: Gnomon. Supporting evidence includes similarity
to: 2 Proteins, and 100% coverage of the annotated genomic
feature by RNAseq alignments, including 49 samples with
support for all annotated introns"
/db_xref="GeneID:111709665"
CDS 48..326
/gene="LOC111709665"
/codon_start=1
/product="BBSome-interacting protein 1-like"
/protein_id="XP_023339221.1"
/db_xref="GeneID:111709665"
/translation="
MSEDKNRFPELVNPVLPKRGLVYQESNPQLVLCKPKLLPLKSMTLEKMERMQKEANEKAKEMQEEIEKEKQAGFTDTIGSEETADVLTLDDD"
misc_feature 48..242
/gene="LOC111709665"
/note="Cilia BBSome complex subunit 10; Region: BBIP10;
pfam14777"
/db_xref="CDD:464310"
ORIGIN
attgtgacacctatatattttaagaaatatgtattaaaatctatagaatgagtgaagacaagaatagatttcctgaactagtaaaccctgttctaccaaaacgtggattagtttatcaagaaagtaatcctcaactagttctctgcaagccaaagcttctgcccctgaagtctatgaccctggagaagatggaaaggatgcagaaggaggcgaacgagaaggcgaaggaaatgcaagaagagattgagaaagagaaacaggctgggttcactgataccatagggtccgaagagaccgcagatgttttaacattagatgacgattagatgatacttcagaaaacactagaatctcaaaatcaattaattgcagttttttccagaaaagtgaactgaaaactttgttaattgtgttaatgggaaattctaacaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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