LOCUS       XM_023465671            1247 bp    mRNA    linear   INV 16-OCT-2023
DEFINITION  PREDICTED: Eurytemora carolleeae band 7 protein AGAP004871
            (LOC111696122), transcript variant X3, mRNA.
ACCESSION   XM_023465671
VERSION     XM_023465671.1
DBLINK      BioProject: PRJNA423276
KEYWORDS    RefSeq.
SOURCE      Eurytemora carolleeae
  ORGANISM  Eurytemora carolleeae
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea;
            Multicrustacea; Hexanauplia; Copepoda; Calanoida; Temoridae;
            Eurytemora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_019396139.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000591075.1-RS_2023_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Eurytemora carolleeae"
                     /mol_type="mRNA"
                     /db_xref="taxon:1294199"
                     /chromosome="Unknown"
     gene            1..1247
                     /gene="LOC111696122"
                     /note="band 7 protein AGAP004871; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 43 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:111696122"
     CDS             269..1216
                     /gene="LOC111696122"
                     /codon_start=1
                     /product="stomatin-4 isoform X3"
                     /protein_id="XP_023321439.1"
                     /db_xref="GeneID:111696122"
                     /translation="

MTPLLTRVDEYAEDTPTPMKKGYPKGEIYEHTPKMNSNGKKNSQDHLACEEGPGICAHLLTLFSMLLIFLSLPISLCFVVKVVQEYERAVIFRLGRLLAGGARGPGVFFIIPCVDIYEKIDMRTQTFDVPPQEANAKPGAQSPFLTILTKDSVTVFVNAIMYYKVKDATSAVTNVDDYSGSARLLAATTLRNVLGTKNLGDILSERESIAQEMQSTLDEATDPWGVQVERVEVKDVRVPEQLQRAMAAEAEAAREARAKVIAAEGEHKASRALRHAAEVIVDSPAALQLRYLQTLNSISCLVKIPADLEQYILFS"

     misc_feature    563..1165
                     /gene="LOC111696122"
                     /note="core domain of the SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; Region: SPFH_like;
                     cl19107"
                     /db_xref="CDD:450254"
ORIGIN      

cggttgaaccaagtccggagaattttctgaacctccgtcctatcctatcctcatcttcgacattagaggttaaacttccagtccaggaggttctatatacaacctctagtagcctctatacaaagctttacagcctctaaacacagataactttcaactgaaacaaagcagaagtaggttcctcagagaacgcccctgaagttgagaggataggacccctgctgcatgattaaactgtatcgcctctgaacacctagaataagatccaatgacgcccctgctcacaagggtggacgaatacgcggaggataccccaactcctatgaagaagggatatcctaaaggagaaatctacgaacacactccgaagatgaacagcaatggaaagaagaacagtcaagatcatctagcatgtgaagagggaccaggaatctgtgctcatcttctaactctcttctcgatgcttcttattttcctttctcttccaatctctctctgctttgtagttaaagttgtacaggaatacgagagagccgttatcttccgtctaggacgtctgctggccggcggggctagaggtcctggtgtattctttataataccctgcgttgatatctacgagaagattgatatgagaactcaaacatttgacgtccccccacaagaggcgaatgcgaagcctggggctcaatcaccattcttgacgattctgaccaaggacagtgttacggtgtttgtcaacgcaatcatgtactacaaggtgaaagatgcaacatcagctgttaccaatgtagacgactacagtggatctgccaggttacttgctgcaacaactctacgtaacgttctgggaaccaagaacctgggagatattctttcagaacgagaatcgatagctcaggaaatgcagtccacccttgatgaagctacagatccttggggagttcaggtagagagggtagaagtaaaggatgttcgtgttccagagcagcttcaacgggccatggcagcagaagctgaagcagcaagagaagctcgtgcaaaggtcatagctgcagaaggagaacataaagctagcagagctctgcggcatgcagcagaagttattgtagacagtccagctgcattacagttgagatacctgcagaccttgaacagtatatcttgtttagttaagatacctgcagaccttgaacagtatatcttgtttagttgagatacctgcagaccttgaacagtatatctta

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