2024-04-29 08:01:59, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_022886064 732 bp mRNA linear PLN 25-OCT-2017 DEFINITION PREDICTED: Durio zibethinus uncharacterized LOC111293270 (LOC111293270), mRNA. ACCESSION XM_022886064 VERSION XM_022886064.1 DBLINK BioProject: PRJNA407962 KEYWORDS RefSeq; includes ab initio. SOURCE Durio zibethinus ORGANISM Durio zibethinus Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019168470.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Durio zibethinus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 24% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..732 /organism="Durio zibethinus" /mol_type="mRNA" /cultivar="Musang King" /isolate="D1" /db_xref="taxon:66656" /chromosome="Unknown" /tissue_type="Fruit stalk" /dev_stage="Mature" /country="Malaysia: Pahang" gene 1..732 /gene="LOC111293270" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111293270" CDS 1..732 /gene="LOC111293270" /codon_start=1 /product="uncharacterized protein LOC111293270" /protein_id="XP_022741799.1" /db_xref="GeneID:111293270" /translation="
MDSFDFDNVKAEKVKAMRKYNRLRSLAEVFRFLELLLALLFLAWTFERVPLAVKISGEFFLKLGSVIASPLFVFFVCNVIIVTLIAKSGIFSAINNADSKLYEEMIKNAENRSKSGSQEEIVYQDKEIISEVNTCTSNCEEMEPESESESESESNSGAEVDNPRVYRRSKSEKLVIKKSEEVKKKLQRSETQNCQKIENIDEKLFPEDELSNEEFQRTIEDFIAKQLRFRRAESLSIVLQSQA"
ORIGIN
atggattcgtttgatttcgataacgtgaaagcagagaaagttaaggcgatgaggaagtacaatcggcttcgaagcttagccgaggtgtttcgttttttggaattgcttttggctttgctgtttttagcatggaccttcgagcgcgtgcctctcgccgtcaaaatctccggcgagttctttttgaaactcggcagcgtcatcgcgagtccgctctttgttttcttcgtctgtaatgtcatcatcgttactctcattgctaagtccggcatcttttctgccattaacaatgccgattccaaactttacgaggaaatgatcaaaaacgctgagaatcgctccaaatcggggtctcaagaagagattgtgtatcaagacaaagagattatctctgaagtgaacacatgtactagcaattgcgaggaaatggagccggagtcagagtcagagtcagagtccgagtcgaactccggtgctgaggtagataaccccagagtgtataggaggagcaagtcagagaagttggtgataaaaaagagtgaggaagttaagaagaaactacaacgatcggagacccagaattgccaaaaaattgaaaatattgacgagaaattgtttccagaagacgaattgagcaatgaagagtttcaacgaacgatcgaagattttatcgccaaacagttgaggtttcgccgagcagagtctctgtctatcgttcttcaaagccaagcttga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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