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2024-04-26 19:06:19, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_022314076            3037 bp    mRNA    linear   INV 11-AUG-2017
DEFINITION  PREDICTED: Myzus persicae uncharacterized LOC111033379
            (LOC111033379), transcript variant X1, mRNA.
ACCESSION   XM_022314076
VERSION     XM_022314076.1
DBLINK      BioProject: PRJNA397782
KEYWORDS    RefSeq.
SOURCE      Myzus persicae (green peach aphid)
  ORGANISM  Myzus persicae
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha;
            Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Myzus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_019102916.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Myzus persicae Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3037
                     /organism="Myzus persicae"
                     /mol_type="mRNA"
                     /strain="clone G006"
                     /db_xref="taxon:13164"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="whole body"
                     /dev_stage="adult (asexual female)"
                     /collected_by="Alex Wilson"
     gene            1..3037
                     /gene="LOC111033379"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 37 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:111033379"
     CDS             186..1280
                     /gene="LOC111033379"
                     /codon_start=1
                     /product="uncharacterized protein LOC111033379 isoform X1"
                     /protein_id="XP_022169768.1"
                     /db_xref="GeneID:111033379"
                     /translation="
MMEIDEDLSAIEIETDPILPEVSSESFGDISCITNDDNEKENIEDPHSIETDESDQEDVTMSGSESGIVEDFTFDPTAFIEISDILDLVGKNWSIFRVSPLWNLNFDANYLNLLSKKLKKFLINRLSNNMKNRKNSFSDISVEIEAKEANQECIALKIYVTNNDTNSTLYTGLLLKSPNYNQNYDKNSLSDMPILMVQGNKSFSIAIHNWLTEHFDCVIRPYEFALYQFLWLIAISMCDAGQLYNETVLYHYLYKCESSKGQMDVKCYAESEFLRSVLAKLSMNRSSSEATSFHYSDLIKVQSDIEDHFKITSGINVSKLKLKAFEAPKVASINVSGKIHVWSSTLIDLMLKYLMELQDNKCMP"
     misc_feature    762..1154
                     /gene="LOC111033379"
                     /note="Kinetochore complex Sim4 subunit Fta1; Region:
                     CENP-L; pfam13092"
                     /db_xref="CDD:432969"
ORIGIN      
cggttgataagtactatctacaaccgtcatttaaacacaaatacaaacaataaataataatcaacattcagcattcaagcattgcaaatttgaaatttaatttttcaaaacagaaccactttagcacagtatacaataattaacaataatctgtgcaataaagtgcctcatataaatactgactaatgatggaaattgacgaagacttaagtgctatagaaatagaaacagatccaattttgccagaagtatcttcggagtcatttggcgatatatcctgtataactaatgatgataatgaaaaagaaaatatcgaagacccacattcaattgaaaccgacgaatctgatcaggaagatgttacaatgtcaggatcagagtcaggaatagttgaagatttcacttttgatccaactgcttttatagaaatatctgatatactagatcttgttggtaaaaattggtcaatattccgtgtatctccattatggaatttgaattttgatgcaaactatttaaatttgttatccaaaaagttgaagaaatttttaataaatcgtctatctaacaacatgaaaaaccgaaaaaattctttctcagatatctctgtggaaattgaagcaaaagaagcaaatcaggaatgtattgcattaaagatttatgttactaacaatgatactaattcaacactttatactggtttgctattaaaatcaccaaattataatcaaaattatgataaaaatagtctatctgatatgcctatattaatggtacaaggaaataaatcattctcaatagccatacataattggctaactgaacattttgattgtgttattcggccatatgaatttgctttgtatcagtttctgtggcttattgctatatcaatgtgtgatgcaggacaattatacaatgaaactgttttataccactacctctataaatgtgaatcatcaaagggtcaaatggatgtaaaatgttatgctgaatcagagtttcttcgatcagttctagccaaactttccatgaatcggtcatcttctgaagctacttcgtttcattattcagatttaattaaagttcaatccgatatagaagaccattttaaaattacaagtggaataaatgtatcaaaattaaaattaaaagcattcgaagcgcctaaagttgcttcaattaatgtttctggaaaaatacatgtttggtcatccacacttattgatttaatgttaaaatatcttatggaactgcaagacaataaatgtatgccttaaaaaattaatttaaaaagtatgcaatatttacatttgttataaatggttttcgagcatactaaattgtaaatactaatactttttattattattttattatctgatagaattaaagttatgtttttatataaatcaaaaactgtatttttcaatttttactaaacaattagccaatttttttttactctttgaaacaagataattacatactataggtatgcccactataccatcaatggactggccgctttgtaacacattgatcaagtcataacaaaagttaactagacctgatttttactaatacacaatctatttcatatatatttctatggttttcactttagtatgtgcgttataataattttataacaaataaaaactactttcgttctactctaactgatgacagaataactttcagcaacgtttacaacataataattgatttcaaatgtatatttggcactcaatagtgcgcataaatcctaagcccaccaataattggcattgtaatgcagttaccagtcgagaggatgtcatgcatgtgttgtctccttactaacattaaatttgagttcagcagaaccaattctttgttgtctgcttaaatactagaatgaatatcaaaattaaaggtaagaacatttaatctgtgagcattttgaatttgtgatatttcacacacatagcttgctaaaaatattaaaatattaattattttgtataagctaatatacaattggttctgttgaattcaaatttttgtttatgcttttgtaagacagagactacatacatgggtagcgtctattaaccttcagttgcatactttattacataaaaaatgagttacaagatgtgttgggtatattcagttaaatacatcgagtatcaaacattaaaacactagcattatttatttgaaaaccaaattttaacaaatgaaattgaatagcatataaacaagggaataagtatttcatgagtatcttaatagctattttaattaccttaaaaatagtttttcaaaatttaatagagattaaatatatattgtgactaacttgtacatcaatcaaattaatataatgaggcatattaaattataagatctaagggcattgaatgattaacaatacattattcagtatttacacagtgtttataaaatcattaatttataaacataaacaattaaaaccatagtgatgattatgcgttcagtatcaaaagttaaattaaagtaaatacaatgtgtaattataaccatattataaaaaattaattttcattatttaaatttcaatggcaacataaaaaaaatcaattttccatgttaagttgattatttgagtttaaaaagatagttattattagtaaaatacattaagtgtacactttcaaactttgaatactgatcgcgtgtttaagataatataaatatagtaaaacagttatattctaacaaacaaaacttttaagaataaataaattaagttcctaacctaagggtaaacataaaaattaaataaggtaattgtaatatagaactatagaagtaaagtgtataagaatattttttttaatcatttatgggttatacatttatgacttaaaatcgtttacaaccaatatcattatataagtaccaatatgtaatataattatataaatagatatattcgcaacactaatttcaatgatatagagcttggtctattaataaatattgaatacaattcactcaaaaaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]