2025-04-02 18:05:22, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_020953443 3021 bp mRNA linear INV 02-MAY-2017 DEFINITION PREDICTED: Drosophila serrata DM7 family protein GG19680-like (LOC110184807), mRNA. ACCESSION XM_020953443 VERSION XM_020953443.1 DBLINK BioProject: PRJNA384652 KEYWORDS RefSeq. SOURCE Drosophila serrata ORGANISM Drosophila serrata Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018367303.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Drosophila serrata Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3021 /organism="Drosophila serrata" /mol_type="mRNA" /strain="Fors4" /isolation_source="11 generation inbred laboratory stock" /db_xref="taxon:7274" /chromosome="Unknown" /sex="pooled male and female" /tissue_type="bodies (no head)" /dev_stage="adult" /geo_loc_name="Australia: Forster" /collection_date="Apr-2015" gene 1..3021 /gene="LOC110184807" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:110184807" CDS 224..2938 /gene="LOC110184807" /codon_start=1 /product="DM7 family protein GG19680-like" /protein_id="XP_020809102.1" /db_xref="GeneID:110184807" /translation="
MEKNRKHKKVKNCKKMARGKKAPAPLEPVSASEEEARTLMPPPPIPVNKEPLEQPEPSIQHMVALKPKFLPNLRSLVFPKMVYEQAKRLVITPLMTYSHDAAAATKLRGARCPSFELPKDMFPSGAPIWKITFLPEELLPMGFDAGGVFATGVLARKYYPTDLLSADHKGQTPPLFIGHRNSSYILPPEVQAQAKGNGNGGGQTQAPPKRIQPLTPAPPPSPPYRRSILKPNASVTDDMNRRLLHHNITVIEIVIMPTYPKPQSNYPMAAPMQMQCNMYAPDLSKVIFATQEIKMTVVAILSTVHQPNVPEVAMATMDNETCPMFELPADIFPVDINRPGPRFLPQRFLPDFCDAGCVFPPGSLPDSVFHGAIRTHYDLEQHHYSMTPPLFVGQCKQQQEQPCDNGTVQVYKIDPVAMQLKKLALRNMAATKKDTTKIPVPLPEGTKRSHDFKLAAQAGKPKGFVLIESDHVPRGAIPTDFFGAFLMGCFFMIAPNNKGVTQSSSESEDDEEDEQEFLDFQNNMFTMVKLNRGSLAGVPAVEKTEVQKAEVKEPETEESEAELNSEEYETEEYLDEDCESEGYEAEEIDTDEYEAEVRRIEEIDPDEIDTDEYEAEEVDPDEIETDEYEADEDKTEELDPDEIETDEYEAEEGKTQELNQDEIETDEYEADEGKIGELNPIEIETYEYKADEGKTKELNQGDIETDEYEPVEAKTKEVNQDEIETDEYEPVEANTKELNQDDIETDEYDPEQADGKKPKVVQKSDIAEPPAKEPSLKRKHTNTDNEYTNRIAPDYTGCDKVYSYFTIDSNLDDIAEAAGDLTTARFEVIVHASELPGIDVNRAVEQFRQVLQCRNEIRAKMTGLINAHDAKMEADHKVVLVSPVPEVNTKRVFRKTCSQCGKNH"
misc_feature 557..>763 /gene="LOC110184807" /note="Domain of unknown function in Drosophila CG15332, CG15333 and CG18293; Region: DM7; smart00688" /db_xref="CDD:128930" misc_feature 1187..>1432 /gene="LOC110184807" /note="Domain of unknown function in Drosophila CG15332, CG15333 and CG18293; Region: DM7; smart00688" /db_xref="CDD:128930" misc_feature <1922..>2464 /gene="LOC110184807" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" ORIGIN
ttcggtgtcagaattttttagtcgttgaccgattcggagctgagcagacctaaccaacaaaaaacgaaacgctttttaattattgcctttcggtggcacttaaattcgattttgtaatacttttgtatagcgcggcatcggctgtgctttatttttcgattgcccacgattcatgtagttcgtgtattggtgatatatacatacatatctctttcctttaagaatggagaagaatcgcaaacacaagaaggttaaaaattgcaaaaaaatggcacgcggcaaaaaagccccggccccgctcgaacccgtcagtgcttcggaggaggaagcgcgtactttgatgccaccgcctcccattccggtcaacaaggagccactagagcaaccggagccatccatccagcacatggtcgctctgaaacccaagttcttgcccaacctaaggagtctggtgttcccgaagatggtatacgagcaggccaagcgtctggtgatcacgccgctgatgacctacagccatgatgccgcggccgccacgaagcttcgcggcgcgcgctgtcccagcttcgagctgcccaaggatatgttccccagtggggcacccatatggaagatcacatttctgccggaggaactgctgccgatgggcttcgatgccggcggcgtctttgccacaggcgtcctggcccgcaaatactatcccacagatttgttgagtgcggatcacaagggccaaacgccgcccctattcattggacatcgcaactcgagctatatcctaccgccggaggtccaggcccaggccaagggcaatgggaacggtgggggccagacacaggccccgcccaaacgcatccagccactgacaccggcaccgccaccttcgccaccctacaggcgcagcatactgaagcccaatgcctccgttacggatgatatgaatcgacgccttctccaccacaacatcaccgtgattgagattgtcattatgccgacttacccgaagccacagtcgaactatcctatggccgctcctatgcagatgcagtgcaacatgtatgcacccgacttgagtaaggtcatctttgcaacgcaggaaattaagatgaccgttgtggccatcctctcgacggtccatcagccgaacgtaccggaggtggcgatggccaccatggacaacgagacgtgtcccatgttcgagctgcctgccgatatctttccggtggacatcaaccggccgggaccacgtttcctgccacagcgtttcctgcccgatttctgtgatgctggttgcgtctttccgccgggctcgctgcccgactccgtgttccacggcgccatccgtacgcactatgacctggagcagcatcactattcgatgacgccaccgctgttcgtgggccaatgcaagcagcagcaggagcaaccgtgtgacaacggaactgtccaagtttacaaaattgacccggtagccatgcagctgaagaagctggccctgaggaatatggcagcgacgaagaaggacaccaccaaaatcccggtgcccctccccgagggcacgaagcgctcccacgactttaagctagcggctcaagccggcaagcccaagggcttcgtcctcatcgaatcggaccatgtgccgcgtggcgccatcccgaccgatttctttggggccttcctcatgggatgcttttttatgattgcgcccaataacaaaggtgtaactcagtcctcatccgagtcggaggatgatgaagaagatgaacaggaattcctggactttcagaataatatgtttactatggtaaaattgaacagaggaagtctggcaggagtgccggcagttgagaaaactgaagttcagaaagctgaagtcaaggagccggaaactgaggaatcggaagccgagctcaattctgaagaatacgaaaccgaagagtacttggacgaagactgcgagtccgagggatatgaggcagaagaaatcgataccgatgagtatgaggctgaagtgcgcaggatcgaggagatcgatccagatgagatcgacaccgatgagtacgaggccgaggaggtcgatcccgatgagatcgagaccgatgagtacgaggctgatgaggacaagaccgaggagctggatcccgatgagatcgagactgatgagtacgaggctgaagagggcaagacccaggagttgaatcaagatgagatcgagaccgatgagtatgaggctgatgagggcaagatcggggagctgaatccaattgaaattgagacctatgagtacaaggctgatgagggcaagaccaaggaactgaatcaaggtgacatcgagaccgatgagtacgagcctgtagaggccaagaccaaggaggtgaatcaagatgagatcgagaccgatgagtacgagcctgtagaggccaataccaaggagctgaatcaagatgacatcgagaccgatgagtatgatcctgagcaagcggatggcaagaagcccaaggtggtccaaaagtccgacatcgcagagcccccggctaaggaacccagtctaaaacgtaaacataccaacactgataacgaatacaccaatcgcatcgcaccggactacactggctgcgacaaggtctacagctacttcaccatcgacagcaacctggatgatattgccgaggctgccggtgacctgaccaccgcccgtttcgaggtcatagtgcatgcctccgagctgccaggcatagacgtgaaccgagccgtggagcagttccgccaggtcctgcagtgccgcaacgagattcgagccaaaatgacgggattgatcaatgcccacgatgcgaagatggaggcggaccacaaggtggtgctggtatctcctgtcccggaagtgaacaccaagcgcgtgtttcgcaagacttgctcgcagtgcggtaaaaaccactagacgaaatccatatcaataacggatatcgtatcaagtatatcgatttttttaaatcttatttacaataaatattaaatttttaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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