2024-04-30 02:37:13, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_019592765 1345 bp mRNA linear PLN 16-DEC-2016 DEFINITION PREDICTED: Lupinus angustifolius extensin-2-like (LOC109351317), mRNA. ACCESSION XM_019592765 VERSION XM_019592765.1 DBLINK BioProject: PRJNA356456 KEYWORDS RefSeq. SOURCE Lupinus angustifolius (narrow-leaved blue lupine) ORGANISM Lupinus angustifolius Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_032014.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Lupinus angustifolius Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1345 /organism="Lupinus angustifolius" /mol_type="mRNA" /cultivar="Tanjil" /db_xref="taxon:3871" /chromosome="LG06" /tissue_type="whole plant" /dev_stage="seedling" /country="Australia: Western Australia" gene 1..1345 /gene="LOC109351317" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:109351317" CDS 35..1114 /gene="LOC109351317" /codon_start=1 /product="extensin-2-like" /protein_id="XP_019448310.1" /db_xref="GeneID:109351317" /translation="
MGTSLGPKHRPRIFYAVAFCLVTISVAADYNTPNYGSEPKHAQYQPHHPNSHSQDQEHPSYKIPIYAYISPPPPHSPPPPSPPPPYVYQSPPPPSPSPPPPYLYKSPPPPSPSPPPPYVYQSPPPPSPSPPPPYVYSSEHPLKNWPHIPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYQSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYQSPPPPSPSPPPPYVYNSEHPLKNWPHIPYFYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPPHHDHLPQYHFPYFYQSPPPPTTLY"
ORIGIN
ataaggaacaactagagctacattctcacaaaatatgggaacttcactagggccaaagcacaggcctagaatcttctatgcagttgcattttgcttagttactattagtgttgctgctgattataatacacctaactatggatccgagccaaagcatgcacaatatcaaccacaccatcctaattcacattcacaagatcaagaacacccatcttacaaaatacccatatatgcatacatttctccaccaccaccccattcacctcccccgccatctccaccacctccatatgtctatcaatctccacctcctccatccccttcacctcctccgccatatctctataagtctccaccacctccatcaccatcaccaccacccccatatgtctatcagtctccgcctcctccatctccttcacctcccccaccatatgtctacagttctgaacaccctctaaaaaattggcctcatataccatatgtctataagtctccccctcctccatctccttcacctcctccaccatatgtctacaagtctccaccacctccatcaccttcaccaccacccccatatgtctatcaatctccacctcctccatctccttcaccgcccccaccatatgtctacaagtctccaccacctccatcaccttcaccaccacccccatatgtttatcagtctccccctcctccatccccttcacctcccccaccatatgtctacaactctgaacaccctctaaaaaattggccccatataccatatttctataagtctcctcccccaccatctccttcaccacctcctccatatgtgtataagtctccacctccaccatctccttcaccacctcctccatatgtgtataagtctccacctccaccatctccttcaccacctcctccatatgtgtataagtctccacctccaccatctccttcaccacctcctccatatgtgtacaagtctccacctccaccatctccatcacctcctccaccatatgtttataaatctcctccacctcctcctcatcatgaccaccttccacaatatcactttccatacttctaccagtcacccccacctcctacaacgctctattaaggttataattaatgcagcttgaactgcttaagtcaaattatgtgagattattattattatggttttttcagacttcatcaataattatggtgtgcactaaagagcctttaatgaatgtagccatcttgtattgttatttattcttgttaatttattaacttattgtactttattcacaatattcatatgatatcatacatggtaattcattgttgtccaatttccatgtcc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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