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2024-04-30 02:37:13, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_019592765            1345 bp    mRNA    linear   PLN 16-DEC-2016
DEFINITION  PREDICTED: Lupinus angustifolius extensin-2-like (LOC109351317),
            mRNA.
ACCESSION   XM_019592765
VERSION     XM_019592765.1
DBLINK      BioProject: PRJNA356456
KEYWORDS    RefSeq.
SOURCE      Lupinus angustifolius (narrow-leaved blue lupine)
  ORGANISM  Lupinus angustifolius
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; genistoids sensu lato; core genistoids;
            Genisteae; Lupinus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_032014.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Lupinus angustifolius Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Lupinus angustifolius"
                     /mol_type="mRNA"
                     /cultivar="Tanjil"
                     /db_xref="taxon:3871"
                     /chromosome="LG06"
                     /tissue_type="whole plant"
                     /dev_stage="seedling"
                     /country="Australia: Western Australia"
     gene            1..1345
                     /gene="LOC109351317"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:109351317"
     CDS             35..1114
                     /gene="LOC109351317"
                     /codon_start=1
                     /product="extensin-2-like"
                     /protein_id="XP_019448310.1"
                     /db_xref="GeneID:109351317"
                     /translation="
MGTSLGPKHRPRIFYAVAFCLVTISVAADYNTPNYGSEPKHAQYQPHHPNSHSQDQEHPSYKIPIYAYISPPPPHSPPPPSPPPPYVYQSPPPPSPSPPPPYLYKSPPPPSPSPPPPYVYQSPPPPSPSPPPPYVYSSEHPLKNWPHIPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYQSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYQSPPPPSPSPPPPYVYNSEHPLKNWPHIPYFYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPPHHDHLPQYHFPYFYQSPPPPTTLY"
ORIGIN      
ataaggaacaactagagctacattctcacaaaatatgggaacttcactagggccaaagcacaggcctagaatcttctatgcagttgcattttgcttagttactattagtgttgctgctgattataatacacctaactatggatccgagccaaagcatgcacaatatcaaccacaccatcctaattcacattcacaagatcaagaacacccatcttacaaaatacccatatatgcatacatttctccaccaccaccccattcacctcccccgccatctccaccacctccatatgtctatcaatctccacctcctccatccccttcacctcctccgccatatctctataagtctccaccacctccatcaccatcaccaccacccccatatgtctatcagtctccgcctcctccatctccttcacctcccccaccatatgtctacagttctgaacaccctctaaaaaattggcctcatataccatatgtctataagtctccccctcctccatctccttcacctcctccaccatatgtctacaagtctccaccacctccatcaccttcaccaccacccccatatgtctatcaatctccacctcctccatctccttcaccgcccccaccatatgtctacaagtctccaccacctccatcaccttcaccaccacccccatatgtttatcagtctccccctcctccatccccttcacctcccccaccatatgtctacaactctgaacaccctctaaaaaattggccccatataccatatttctataagtctcctcccccaccatctccttcaccacctcctccatatgtgtataagtctccacctccaccatctccttcaccacctcctccatatgtgtataagtctccacctccaccatctccttcaccacctcctccatatgtgtataagtctccacctccaccatctccttcaccacctcctccatatgtgtacaagtctccacctccaccatctccatcacctcctccaccatatgtttataaatctcctccacctcctcctcatcatgaccaccttccacaatatcactttccatacttctaccagtcacccccacctcctacaacgctctattaaggttataattaatgcagcttgaactgcttaagtcaaattatgtgagattattattattatggttttttcagacttcatcaataattatggtgtgcactaaagagcctttaatgaatgtagccatcttgtattgttatttattcttgttaatttattaacttattgtactttattcacaatattcatatgatatcatacatggtaattcattgttgtccaatttccatgtcc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]