2024-05-06 02:29:09, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_018882966 1620 bp mRNA linear PLN 07-JAN-2024 DEFINITION Sugiyamaella lignohabitans Kex1p (KEX1), partial mRNA. ACCESSION XM_018882966 VERSION XM_018882966.1 DBLINK BioProject: PRJNA342695 BioSample: SAMN04417247 KEYWORDS RefSeq. SOURCE Sugiyamaella lignohabitans ORGANISM Sugiyamaella lignohabitans Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Trichomonascaceae; Sugiyamaella. REFERENCE 1 (bases 1 to 1620) AUTHORS Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M., Marx,H. and Mattanovich,D. TITLE Complete genome sequence and transcriptome regulation of the pentose utilising yeast Sugiyamaella lignohabitans JOURNAL Unpublished REFERENCE 2 (bases 1 to 1620) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-JAN-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1620) AUTHORS Peymann,A. and Graf,A. TITLE Direct Submission JOURNAL Submitted (18-FEB-2016) Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna 1190, Austria COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_031672). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1620 /organism="Sugiyamaella lignohabitans" /mol_type="mRNA" /strain="CBS 10342" /type_material="culture from holotype of Candida lignohabitans" /db_xref="taxon:796027" /chromosome="A" gene <1..>1620 /gene="KEX1" /locus_tag="AWJ20_993" /db_xref="GeneID:30038086" CDS 1..1620 /gene="KEX1" /locus_tag="AWJ20_993" /inference="similar to AA sequence:KEGG_Orthology:K01288" /note="Cell death protease essential for hypochlorite-induced apoptosis; involved in the processing of killer toxin and alpha factor precursor; cleaves Lys and Arg residues from the C-terminus of peptides and proteins; GO_component: GO:0005794 - Golgi apparatus [Evidence IEA,IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0005802 - trans-Golgi network [Evidence IDA] [PMID 8308064]; GO_function: GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]; GO_function: GO:0004185 - serine-type carboxypeptidase activity [Evidence TAS] [PMID 8308064]; GO_process: GO:0006915 - apoptotic process [Evidence IEA]; GO_process: GO:0006915 - apoptotic process [Evidence IMP] [PMID 23656787]; GO_process: GO:0006508 - proteolysis [Evidence IEA,IEA]" /codon_start=1 /product="Kex1p" /protein_id="XP_018735202.1" /db_xref="GeneID:30038086" /translation="
MDGAMMEIGPFRARDGGEKLVENEGSWHKYANVLFIDQPLGTGFSTADTNSYIHELDEMANDVLTFLEKFFAIFPEYLTNELYLAGESYAGQYIPYIARAMVESNKKLKPGSYKDPQGKHLFNLKGVMIGNGWIDPIHQYLSYVPYSYSVGLLKSGTKMANDAEEAHKKCAQALSDSENYSVHLRECETIAKSMLSDFSDQKDCFNIYDVRLTDSYPSCGMNWPPDLTSVKPYLRRPDVLKALNVPSVNGWDECSGAVQGAFTASHSPPSIQIIPQLIDDGVNVMMFNGDQDFICNHLGNEMLIDSMTWGGRTGFDDSVDKSEAENEWLFNDVAGGTVTAGRNLTYVRVYNGSHMLPWDQPEQTRFIFNVFSGLTTWDSQGAITNVHPDADADLSPNKDTEKEKLVSDATWRAYYRAGTVALVVVIIIALIVIVFVYRSRQQSGLRVMGRFSERNASGLFKSFVNGFSRWKAPHKDNDQDGSYYGLSNLPRPGMPSIIVEDDEESALDTGSSVGSDEVESPYNDSSSNVVFEAPEDTTK"
misc_feature 1..1113 /gene="KEX1" /locus_tag="AWJ20_993" /note="Serine carboxypeptidase; Region: Peptidase_S10; cl08270" /db_xref="CDD:415488" ORIGIN
atggacggtgctatgatggagattggcccgttccgagcaagggatggcggagagaagttggtggaaaacgagggctcgtggcataaatatgcgaatgtgctgtttattgaccagcctttgggaaccgggtttagtactgccgataccaacagttatattcatgagctggacgagatggcgaatgatgtgctgacgtttttggagaaatttttcgcgatcttccccgagtatttgactaatgagttgtatttggccggcgagtcgtatgccggtcagtatattccctatatcgcacgtgcgatggtggagtcgaacaagaaactcaagccaggcagttataaagaccctcagggcaaacatttgttcaatttgaagggtgtcatgattggtaatggatggatagaccctattcaccagtacctgtcgtacgtaccttattcatacagtgttggtctgttaaaatcgggaactaaaatggctaatgatgccgaagaggctcataaaaagtgtgctcaagcattgtcggattcagaaaattatagtgtccatttgcgagaatgcgagacgattgcgaagtccatgttgagtgatttcagtgaccagaaggactgtttcaatatctatgatgtccgtctgactgacagttatcccagctgtggaatgaactggccgccagatttgaccagtgtcaaaccttatcttcgccgaccagatgttctcaaagctcttaatgtgccgtctgtcaatggctgggacgaatgtagcggtgccgtacagggcgcattcaccgcatcacactcgcctccttctattcagattattcctcagttgattgacgatggtgtgaatgtgatgatgtttaacggtgatcaggatttcatctgtaaccatttgggtaatgagatgttaatagatagcatgacctggggaggtcgtactgggttcgacgattccgttgacaagtcagaagcagagaacgagtggcttttcaacgatgtggcaggaggaactgtcaccgctggccgtaatctcacttatgttcgagtttataatggaagtcacatgctgccatgggaccaaccagagcaaacccggtttattttcaatgttttttcaggtctcactacctgggacagccaaggagctataaccaatgttcaccctgatgcagatgcagacctgtcccccaacaaagacactgagaaggaaaaactcgtcagcgacgctacctggcgagcttattaccgagcaggaacagtggctctggtagtggtgattatcattgctctgattgtgattgtatttgtataccgatcaagacagcagtcaggactgcgagtcatgggcagattctcagaaagaaacgccagcgggctgttcaaatcgttcgtcaacgggttcagcagatggaaggctccacacaaagacaacgaccaagacggcagctactacgggctgtcgaacctaccacgacctggcatgcccagcatcatcgtcgaagacgacgaagagtccgcactcgacacaggcagcagcgtcggctccgacgaagtcgagtccccctacaacgacagctcctccaacgttgtcttcgaggcccctgaagacaccaccaagtaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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