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2024-05-06 02:29:09, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_018882966            1620 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Kex1p (KEX1), partial mRNA.
ACCESSION   XM_018882966
VERSION     XM_018882966.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Trichomonascaceae;
            Sugiyamaella.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1620)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1620)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031672).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="A"
     gene            <1..>1620
                     /gene="KEX1"
                     /locus_tag="AWJ20_993"
                     /db_xref="GeneID:30038086"
     CDS             1..1620
                     /gene="KEX1"
                     /locus_tag="AWJ20_993"
                     /inference="similar to AA sequence:KEGG_Orthology:K01288"
                     /note="Cell death protease essential for
                     hypochlorite-induced apoptosis; involved in the processing
                     of killer toxin and alpha factor precursor; cleaves Lys
                     and Arg residues from the C-terminus of peptides and
                     proteins; GO_component: GO:0005794 - Golgi apparatus
                     [Evidence IEA,IEA]; GO_component: GO:0016021 - integral
                     component of membrane [Evidence IEA]; GO_component:
                     GO:0016020 - membrane [Evidence IEA]; GO_component:
                     GO:0005802 - trans-Golgi network [Evidence IDA] [PMID
                     8308064]; GO_function: GO:0004180 - carboxypeptidase
                     activity [Evidence IEA]; GO_function: GO:0016787 -
                     hydrolase activity [Evidence IEA]; GO_function: GO:0008233
                     - peptidase activity [Evidence IEA]; GO_function:
                     GO:0004185 - serine-type carboxypeptidase activity
                     [Evidence IEA]; GO_function: GO:0004185 - serine-type
                     carboxypeptidase activity [Evidence TAS] [PMID 8308064];
                     GO_process: GO:0006915 - apoptotic process [Evidence IEA];
                     GO_process: GO:0006915 - apoptotic process [Evidence IMP]
                     [PMID 23656787]; GO_process: GO:0006508 - proteolysis
                     [Evidence IEA,IEA]"
                     /codon_start=1
                     /product="Kex1p"
                     /protein_id="XP_018735202.1"
                     /db_xref="GeneID:30038086"
                     /translation="
MDGAMMEIGPFRARDGGEKLVENEGSWHKYANVLFIDQPLGTGFSTADTNSYIHELDEMANDVLTFLEKFFAIFPEYLTNELYLAGESYAGQYIPYIARAMVESNKKLKPGSYKDPQGKHLFNLKGVMIGNGWIDPIHQYLSYVPYSYSVGLLKSGTKMANDAEEAHKKCAQALSDSENYSVHLRECETIAKSMLSDFSDQKDCFNIYDVRLTDSYPSCGMNWPPDLTSVKPYLRRPDVLKALNVPSVNGWDECSGAVQGAFTASHSPPSIQIIPQLIDDGVNVMMFNGDQDFICNHLGNEMLIDSMTWGGRTGFDDSVDKSEAENEWLFNDVAGGTVTAGRNLTYVRVYNGSHMLPWDQPEQTRFIFNVFSGLTTWDSQGAITNVHPDADADLSPNKDTEKEKLVSDATWRAYYRAGTVALVVVIIIALIVIVFVYRSRQQSGLRVMGRFSERNASGLFKSFVNGFSRWKAPHKDNDQDGSYYGLSNLPRPGMPSIIVEDDEESALDTGSSVGSDEVESPYNDSSSNVVFEAPEDTTK"
     misc_feature    1..1113
                     /gene="KEX1"
                     /locus_tag="AWJ20_993"
                     /note="Serine carboxypeptidase; Region: Peptidase_S10;
                     cl08270"
                     /db_xref="CDD:415488"
ORIGIN      
atggacggtgctatgatggagattggcccgttccgagcaagggatggcggagagaagttggtggaaaacgagggctcgtggcataaatatgcgaatgtgctgtttattgaccagcctttgggaaccgggtttagtactgccgataccaacagttatattcatgagctggacgagatggcgaatgatgtgctgacgtttttggagaaatttttcgcgatcttccccgagtatttgactaatgagttgtatttggccggcgagtcgtatgccggtcagtatattccctatatcgcacgtgcgatggtggagtcgaacaagaaactcaagccaggcagttataaagaccctcagggcaaacatttgttcaatttgaagggtgtcatgattggtaatggatggatagaccctattcaccagtacctgtcgtacgtaccttattcatacagtgttggtctgttaaaatcgggaactaaaatggctaatgatgccgaagaggctcataaaaagtgtgctcaagcattgtcggattcagaaaattatagtgtccatttgcgagaatgcgagacgattgcgaagtccatgttgagtgatttcagtgaccagaaggactgtttcaatatctatgatgtccgtctgactgacagttatcccagctgtggaatgaactggccgccagatttgaccagtgtcaaaccttatcttcgccgaccagatgttctcaaagctcttaatgtgccgtctgtcaatggctgggacgaatgtagcggtgccgtacagggcgcattcaccgcatcacactcgcctccttctattcagattattcctcagttgattgacgatggtgtgaatgtgatgatgtttaacggtgatcaggatttcatctgtaaccatttgggtaatgagatgttaatagatagcatgacctggggaggtcgtactgggttcgacgattccgttgacaagtcagaagcagagaacgagtggcttttcaacgatgtggcaggaggaactgtcaccgctggccgtaatctcacttatgttcgagtttataatggaagtcacatgctgccatgggaccaaccagagcaaacccggtttattttcaatgttttttcaggtctcactacctgggacagccaaggagctataaccaatgttcaccctgatgcagatgcagacctgtcccccaacaaagacactgagaaggaaaaactcgtcagcgacgctacctggcgagcttattaccgagcaggaacagtggctctggtagtggtgattatcattgctctgattgtgattgtatttgtataccgatcaagacagcagtcaggactgcgagtcatgggcagattctcagaaagaaacgccagcgggctgttcaaatcgttcgtcaacgggttcagcagatggaaggctccacacaaagacaacgaccaagacggcagctactacgggctgtcgaacctaccacgacctggcatgcccagcatcatcgtcgaagacgacgaagagtccgcactcgacacaggcagcagcgtcggctccgacgaagtcgagtccccctacaacgacagctcctccaacgttgtcttcgaggcccctgaagacaccaccaagtaa
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]