LOCUS       XM_018882884            2244 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Zn(2+) transporter ZRG17 (ZRG17),
            partial mRNA.
ACCESSION   XM_018882884
VERSION     XM_018882884.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Trichomonascaceae;
            Sugiyamaella.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2244)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2244)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031672).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="A"
     gene            <1..>2244
                     /gene="ZRG17"
                     /locus_tag="AWJ20_913"
                     /db_xref="GeneID:30037998"
     CDS             1..2244
                     /gene="ZRG17"
                     /locus_tag="AWJ20_913"
                     /note="Endoplasmic reticulum zinc transporter; part of a
                     heterodimeric transporter with Msc2p that transfers zinc
                     from the cytosol to the ER lumen; member of the cation
                     diffusion facilitator family of efflux pumps;
                     zinc-regulated directly through Zap1p; transcription
                     induced under conditions of zinc deficiency; GO_component:
                     GO:0005783 - endoplasmic reticulum [Evidence IEA];
                     GO_component: GO:0005783 - endoplasmic reticulum [Evidence
                     IDA] [PMID 14562095]; GO_component: GO:0005783 -
                     endoplasmic reticulum [Evidence IDA] [PMID 15961382];
                     GO_component: GO:0005789 - endoplasmic reticulum membrane
                     [Evidence IEA]; GO_component: GO:0016021 - integral
                     component of membrane [Evidence IEA,IEA]; GO_component:
                     GO:0016021 - integral component of membrane [Evidence ISM]
                     [PMID 12192589]; GO_component: GO:0016020 - membrane
                     [Evidence IEA]; GO_function: GO:0008324 - cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence ISS] [PMID 15961382];
                     GO_function: GO:0005385 - zinc ion transmembrane
                     transporter activity [Evidence IGI,IMP] [PMID 15961382];
                     GO_process: GO:0006812 - cation transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]; GO_process: GO:0006829 - zinc ion transport
                     [Evidence IMP] [PMID 10978274]; GO_process: GO:0006829 -
                     zinc ion transport [Evidence IGI,IMP] [PMID 15961382]"
                     /codon_start=1
                     /product="Zn(2+) transporter ZRG17"
                     /protein_id="XP_018735128.1"
                     /db_xref="GeneID:30037998"
                     /translation="

MSGGSGSGSESAFSSTSLMMAPVATAVDSSAPVSMPNQAQSQQTRMQTNQKRPSNSSGQAHNGLSQSPSPPLISSSLTSTSSSSSSSSSSLSSHLHSQSSSPSSSPLPVQTVPSRGQKPSSHSASSSIASASSLPEISTSPEKATTAPSTPVTAPASSRPVSLYASSGFYGTSGSAHTSNSTSATGAGGTAGGIPSSSSLLKNAPPLRPPQPSLSDLIMSEAASASGGGPSIDLPIPGQQYYHSRSQSHSYHSTPQSLRCPSPNSIKRSSWYGMPTVDDYPGLNGVPPTGANTSMTTPSTIISPPSPTLEARLPMSPPPRSISPMRPMSYHQKQQANNTNQPFNFVSTTLSPSPVSSTLSPSPAKANQRRGHRYKHSSVSINFFQEPPARAPLAIPASLPIPNFTEWRQSMSREQQIRLAWTVCHISAAVLVYNCDAPFSALAALSHLLLYDAMGAILCVAVDVLGNFDVWKQSSIHLPFGLERIEVLAGFALSVTLIFMGGDIMSHVVQELVQSLYAPGQHGHSHGRAVHSHVAGMTMEDEHEEALNWASVVFRVMLGIVATVVSTVGLKNHSRISRTMNRDRDRDRETDSTSFKWMPSMLSNPTHLMTLTFSVAILFFPLLGSSGYVIVDALLTPVIATSMCYIGWLHAKALAGMLVMSYSGHDRIEDIDEQISQDPLVQSVSEISLWQVHHELWLASMKIVMSGTDDDERRLRERASSIVRSTMGADDHCRWETTVDITRTTLE"

     misc_feature    <742..>1242
                     /gene="ZRG17"
                     /locus_tag="AWJ20_913"
                     /note="variable surface protein Vir28; Provisional;
                     Region: PTZ00249"
                     /db_xref="CDD:140276"
     misc_feature    1411..2223
                     /gene="ZRG17"
                     /locus_tag="AWJ20_913"
                     /note="cation diffusion facilitator family transporter;
                     Region: CDF; TIGR01297"
                     /db_xref="CDD:273544"
ORIGIN      

atgtctggtggatctggctcgggttctgagtctgctttttcttcgacctcgctgatgatggctcctgtagctacggctgtggactcgtctgcaccggtttcaatgccgaatcaagctcaaagtcaacagactcgaatgcagacaaatcagaaacgaccgagcaattcgtcgggtcaggcacataacggtctgtcccagtctccttctcctccactaatatcctcgtcattaacatcaacatcctcctcctcttcttcgtcgtcatcttcattgtcatcacatttgcattcgcaatcttcatcgccatcttcatcgccattaccagtacaaacggtaccctctagaggccaaaaaccttcttctcattccgcctcgtcgtctattgcatctgcttcttcgctgcctgaaattagcacttctccagaaaaggcaactactgctccttctactcccgtaacggcacctgcatcgtccagacctgtcagtctgtatgccagtagcggtttttatggcacctcaggctcagcacacacttctaattctacttctgctactggtgctggtggtactgctggtggtattccgagttcctcttctttgctgaaaaatgctcctccattgagacctcctcagcctagtttatccgatttaatcatgagtgaagcagcatctgcttctggtgggggtccgtctatcgatcttcctattcctggtcaacaatattatcattctcgatcgcaatcacattcataccactcaacaccacagtcgttgcgatgtccttcccctaattcaatcaaaagatccagttggtatggaatgcccactgtcgacgactatccaggtctcaacggggtacctccaactggtgctaatactagcatgacaactccttctaccattatctcacctccatctcccactttagaagcaagactaccaatgtctcctccccccagaagcatatctcccatgagacccatgtcctatcatcagaaacaacaggctaataatactaatcagccatttaatttcgtgtcgacaaccctgtctccatctccagtgtcgtccacgttgtcaccatctccagcaaaggccaatcaacgtcgtggacatcgatataaacattcgtcggtctcaatcaacttttttcaagaaccacctgctcgtgctccattagccattccggcctcattaccaattcctaatttcactgaatggagacagagtatgtcgcgagaacagcagatccgactggcttggactgtatgccatatttccgcggcagttttagtatacaattgcgatgctccgtttagcgccctggctgcattgtcgcatttacttttgtacgatgctatgggagccattctgtgtgttgctgtagatgtactgggaaatttcgatgtgtggaaacagagcagtatccatcttccgtttggattggaacgaatcgaggtgctagctggctttgcactgtctgtaacgctgatattcatgggtggtgatattatgtcgcatgttgttcaagaactcgttcaatctctatacgcacctggtcaacatggccattctcatggccgagctgttcatagccatgttgcaggtatgacgatggaagacgagcatgaagaagctctcaactgggcttcggttgtgtttcgagtcatgttgggtattgtagctactgttgtgtctactgtagggctcaagaaccattcccgaatcagtcgtaccatgaaccgtgaccgcgatcgtgatcgcgagactgactcgaccagtttcaagtggatgccgtcgatgttgtcaaatcccactcatttaatgactctgaccttttcagtggccattctgttcttcccgttgttgggatcgtctggttacgttattgttgatgcgcttctgacgcctgttattgctacgtccatgtgctatattggctggttacatgccaaagcacttgctggtatgctagtcatgagctactcgggtcacgaccgcatcgaagacatcgacgagcaaatcagtcaggaccccctggtccagtcagtctcagaaatcagcctctggcaggtgcaccacgaactctggctggccagcatgaaaatcgtcatgtccggaactgacgacgacgaacgccggcttcgcgaacgcgcctcgtccatcgtccgatccaccatgggagccgacgaccactgccgctgggaaacaaccgtcgacatcactagaactaccttagaataa

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