LOCUS       XM_018882808            2655 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Ysp2p (YSP2), partial mRNA.
ACCESSION   XM_018882808
VERSION     XM_018882808.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Trichomonascaceae;
            Sugiyamaella.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2655)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2655)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031672).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="A"
     gene            <1..>2655
                     /gene="YSP2"
                     /locus_tag="AWJ20_84"
                     /db_xref="GeneID:30037916"
     CDS             1..2655
                     /gene="YSP2"
                     /locus_tag="AWJ20_84"
                     /note="Protein involved in programmed cell death; mutant
                     shows resistance to cell death induced by amiodarone or
                     intracellular acidification; YSP2 has a paralog, YHR080C,
                     that arose from the whole genome duplication;
                     GO_component: GO:0005737 - cytoplasm [Evidence IDA] [PMID
                     24390141]; GO_component: GO:0016021 - integral component
                     of membrane [Evidence IEA]; GO_component: GO:0016020 -
                     membrane [Evidence IEA]; GO_component: GO:0031966 -
                     mitochondrial membrane [Evidence IEA]; GO_component:
                     GO:0005739 - mitochondrion [Evidence IEA]; GO_component:
                     GO:0005739 - mitochondrion [Evidence IDA] [PMID 16962064];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     ND]; GO_process: GO:0006915 - apoptotic process [Evidence
                     IEA]; GO_process: GO:0006915 - apoptotic process [Evidence
                     IMP] [PMID 16962064]"
                     /codon_start=1
                     /product="Ysp2p"
                     /protein_id="XP_018734337.1"
                     /db_xref="GeneID:30037916"
                     /translation="

MTDSESSSYHHQARGVPFKPSEHEHRRGHRDLLKALSDHPKSGSNGNLTRTSSASSKTSEHPSAVESTSNEDGLSHSESFGYHSSKSEDHSHASSASHFLSSVLTVAQNAANSLAGLKNGEHEESSRSYSEADESESVSEASMSHQRGEDGKLSEVKIEPVRSTISTMGKGELSLATLGFSRDSGSQHRAATPSGEGKKSPQLTDSLKPTSPNANEGYVSGGEGEFNLPEFHSNKFKRSVSITRNRSRRNTNKSMEQPPFRAVSSSTVSTESNEDEDSPEDSVTAFPEGADGDHHLTGFAYANQKRNKEFHRLFKSVQPDDYLLDDFNCALSKEILIQGKMYVSERHVCFNSNILGWVTNLVIAFDEIVTMEKKMTAGLFPNGIVIQTLHARHSFASFVNRDSVIDFLMSIWKKSSPHQPNRSEAYANGSAVNMSDSESTSSTDKERNREVDSDDGSFSYGSSGEVISDELDTDDEFGETARDSPSESANKDSSGGKAPAAGNGSGDGAGADSGSGSGSWPVPLEGPETHAPTDLPALDANDKELATETIHAPLGIVANLLFGSDSTWYKKFLTENQKNIKLGEVPPFEADGGNKTRHYEYVKPLSGPVGPKQTKCISTDTIEKWDLENYVVVTTATSTPDVPSGGSFVTKSRTGLCWAPGNSTKIVISYHIEWSAKSWLKGPIEKGALDGQTQYAKDLVAAINNTLKSKSKSKAPGGIAVTHKKPLKKKRREKVKKVKIDVASAPKSSLEKFMNLLTENPVPGVPLPTWALLTIGIILFSAIRWMFFSPSVPTEVEQARLMRVEEEYQMWKWFEDRGRVGHPLVHRGEGKFDDGDILRYPIFQPGVSSHVKGKKGSYSEQEVLEAIRITEHRLSILKERLNST"

     misc_feature    955..1236
                     /gene="YSP2"
                     /locus_tag="AWJ20_84"
                     /note="GRAM domain-containing protein (GRAMDC) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; Region:
                     PH-GRAM_GRAMDC; cd13220"
                     /db_xref="CDD:275406"
     misc_feature    1630..2073
                     /gene="YSP2"
                     /locus_tag="AWJ20_84"
                     /note="Domain of unknown function (DUF4782); Region:
                     DUF4782; pfam16016"
                     /db_xref="CDD:435072"
ORIGIN      

atgacagactcagaatcgagttcataccatcatcaggcaagaggagtgccattcaaaccatcggaacatgaacatcgacgtggccatcgagatcttttaaaggcactctcagaccacccaaaaagcggtagtaacggtaatttaactcgaacgtcgtctgcctcgtctaagacttcagaacatccaagtgctgtggagtccacatctaatgaggacggtcttagccattctgaaagctttggatatcattcttccaaatcggaagaccattcacatgcttcatcagcctctcactttttaagcagcgtcttgacagtggctcagaatgctgctaattccttggcagggctaaaaaatggggaacatgaggaatcgtctagatcctatagcgaagctgatgaaagtgaaagcgtgagtgaggccagtatgagccatcaacggggagaagacggtaaattgagtgaagtaaaaattgaaccagttcgttcaaccatttcaacaatgggcaagggcgagctatcattagccacgctagggttttctcgagattcagggtcccagcacagggctgcaactccttcaggtgaaggaaagaagtcaccccagcttaccgactcattgaagccgacctcaccaaacgcaaacgaaggttatgtctcaggaggtgaaggtgaattcaatctcccggaattccattctaataaatttaagagatcggttagcataaccagaaatagatctcgtcggaatacaaacaagtctatggaacaaccaccatttagagcagttagctcgtcaacagtaagcactgaatcaaatgaagatgaggattcacctgaagatagtgtcacagcgtttcctgagggcgctgatggtgatcatcacttgacaggatttgcatatgccaaccagaaacgaaataaagaattccatcgtttattcaaatcggttcagcctgacgactatctcctggatgatttcaattgtgctctcagcaaggagattctgattcaaggtaaaatgtacgtttctgagcgacatgtttgtttcaattccaacattctcggttgggttacaaatcttgttattgcattcgacgaaattgttactatggagaaaaagatgactgccggtctattccccaatggtatcgtaatccagacattacatgctcgacactcgtttgcaagtttcgtcaatcgagacagcgtgattgactttctcatgagtatttggaagaagagtagtcctcatcaaccaaatcggtcggaggcgtatgcgaatgggtctgctgttaatatgtcagactcagagtcgacaagctccaccgacaaggaaaggaatagggaagttgattctgatgatggatcgttttcatatggatctagtggagaagtcatcagtgatgaacttgacacggatgatgaatttggtgagactgctagagacagtccgagcgaaagtgccaacaaagatagctctgggggtaaagctcctgcagctggaaatggctcaggagacggagcaggcgctgactcaggttctggatcaggctcttggcccgttcctcttgagggtccagaaactcatgctccaaccgacttgcctgcattagacgccaatgataaggagctagcaacggaaacaattcatgctccacttggcattgtcgcgaatcttcttttcggatctgattccacatggtataagaagtttttgacggaaaatcaaaagaatatcaagcttggcgaagtgccaccgtttgaggccgatgggggcaataaaactcgtcattacgaatacgtaaaaccattaagtggtccagtgggcccaaaacaaacaaaatgtattagtacagatacaattgaaaagtgggatcttgaaaactacgtcgtagtaactacagctacatctactcctgatgttccaagtggtggctcatttgttacgaagtctaggactggcctctgttgggcacccgggaatagcaccaagattgttatatcttatcacatcgagtggtcggcaaagagttggcttaaggggccaattgaaaaaggagcactggatggacaaactcagtatgctaaggatttggtagctgcgattaacaacacattgaaatcaaagagtaaatctaaggcacctggtggaattgctgtcacacacaagaagccacttaaaaagaagaggagagaaaaggttaagaaagtcaagattgatgttgcatctgctcccaagagtagccttgaaaagtttatgaatttactgacggaaaatccagtacctggtgtccctcttcctacatgggctttgttgactattggcataattctcttctctgcaattcgatggatgtttttctcgccatcggtacccaccgaagttgaacaagcacgattgatgcgggttgaggaggaatatcagatgtggaaatggtttgaagatagaggacgagtgggacatcctcttgtgcatagaggtgagggtaaattcgacgatggcgatatacttcgttatcctattttccagccaggcgtatctagccatgttaaaggcaagaaaggctcttattccgagcaggaagtgttggaagcaattcgaattacagagcatagattgagcatattgaaagagcgtttgaattcaacgtga

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