LOCUS       XM_018882603            1212 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Bsd2p (BSD2), partial mRNA.
ACCESSION   XM_018882603
VERSION     XM_018882603.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Trichomonascaceae;
            Sugiyamaella.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1212)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1212)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031672).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="A"
     gene            <1..>1212
                     /gene="BSD2"
                     /locus_tag="AWJ20_651"
                     /db_xref="GeneID:30037707"
     CDS             1..1212
                     /gene="BSD2"
                     /locus_tag="AWJ20_651"
                     /note="Heavy metal ion homeostasis protein; facilitates
                     trafficking of Smf1p and Smf2p metal transporters to the
                     vacuole where they are degraded, controls metal ion
                     transport, prevents metal hyperaccumulation, functions in
                     copper detoxification; GO_component: GO:0005783 -
                     endoplasmic reticulum [Evidence IEA,IEA]; GO_component:
                     GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID
                     9115231]; GO_component: GO:0000324 - fungal-type vacuole
                     [Evidence IDA] [PMID 23708375]; GO_component: GO:0000329 -
                     fungal-type vacuole membrane [Evidence IDA] [PMID
                     14988731]; GO_component: GO:0016021 - integral component
                     of membrane [Evidence IEA]; GO_component: GO:0016021 -
                     integral component of membrane [Evidence ISM] [PMID
                     12192589]; GO_component: GO:0016020 - membrane [Evidence
                     IEA,IEA]; GO_component: GO:0005773 - vacuole [Evidence
                     IEA,IEA]; GO_function: GO:0005515 - protein binding
                     [Evidence IPI] [PMID 14988731]; GO_process: GO:0030001 -
                     metal ion transport [Evidence IMP] [PMID 9115231];
                     GO_process: GO:0006623 - protein targeting to vacuole
                     [Evidence IMP] [PMID 14988731]; GO_process: GO:0006623 -
                     protein targeting to vacuole [Evidence IMP] [PMID
                     9988727]; GO_process: GO:0006950 - response to stress
                     [Evidence IEA]; GO_process: GO:0006810 - transport
                     [Evidence IEA]; GO_process: GO:0006511 -
                     ubiquitin-dependent protein catabolic process [Evidence
                     IMP] [PMID 16456538]"
                     /codon_start=1
                     /product="Bsd2p"
                     /protein_id="XP_018734875.1"
                     /db_xref="GeneID:30037707"
                     /translation="

MANQAYSRVPSGPPSYRSGSFSDDDGNANGRGETDRLVDAFDESDDDDVEGDDRNFSGRHQHQDHQHQRQNQRGNTGHGSEVLFDAEDGASTSETRQYEDFETGVVVTRNIRSGTSSPAPGEGDFDSSGSSSGNRSGVSTPVSPSRSTGGGFLSSFWPRGPRRASHNNDGVFANLTARTNGEEKPDDAEQEPPSYEEAAADATPPYWETTIMAPGLTDELFIEGLPVGSPVNFAWNMIVSSAFQFVGFFLTYLLHTSHAAKQGSRAGLGITLLQCGFYLQPEPLPGSNHGGNNNNINNPGEFEPSNPNDFGGTTTNIPGTVSESHHPVVATIASPPHNPGAAAGWISTLLMVVGSILILKSLADYIQARRMEIAIIRSNNASDTSSTPADETPAAATASESIV"

     misc_feature    487..1134
                     /gene="BSD2"
                     /locus_tag="AWJ20_651"
                     /note="Protein of unknown function (DUF2370); Region:
                     DUF2370; pfam10176"
                     /db_xref="CDD:401984"
ORIGIN      

atggccaaccaagcatactcgagggtgccttcaggacctccttcatacagatcaggcagtttcagcgatgacgatggaaatgcaaatggccgaggagaaacagaccgtttagttgatgcttttgatgagagcgatgacgatgatgtggagggtgatgaccggaacttttctggccgccaccagcatcaagaccatcagcaccagcgtcagaaccagcgtggtaatactggacatggtagtgaggttcttttcgatgccgaggatggcgcttcgacatcggaaactagacagtacgaagattttgaaacaggggtcgtggtgactagaaatattcgcagtggtaccagctcaccagctccaggagagggtgatttcgattctagtggaagtagcagtggaaacaggagcggggtcagcacacctgtttcaccatcaagaagtacaggaggagggtttttgtcgtctttttggccacgaggacctcgtagagcgtctcataataacgacggggtgtttgctaatttaactgccagaaccaatggtgaagagaaaccagatgatgctgaacaggaacctccttcatatgaagaagcagctgctgatgccactccaccatactgggaaacaacaattatggcccctggtctgacggacgagctgttcattgaaggacttcctgttggcagcccagtcaactttgcctggaacatgattgtatcatcagcattccagtttgtcgggttcttcttgacctatcttttacacacatcgcatgctgccaaacaaggatcacgagccggactaggtatcactcttctccagtgtggattctacctacaacccgagccactgccaggcagtaaccacggaggaaacaataacaacatcaacaaccccggtgaatttgagccatcgaatcccaatgattttggcggtactactaccaacatccccggcaccgtttccgaatcacaccacccggtcgtggccacaatcgcatctccaccccacaatcccggtgccgcggccggctggatctcgaccctgctcatggtggtaggctcgatcctcattctcaagagtctggccgactacatccaggcccgccgaatggaaattgccatcatccgaagcaacaacgccagcgacacctcgtccacccctgctgatgagacgcctgccgctgccactgcgtcagaatccattgtttaa

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