LOCUS       XM_018880675             864 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Ted1p (TED1), partial mRNA.
ACCESSION   XM_018880675
VERSION     XM_018880675.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Trichomonascaceae;
            Sugiyamaella.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 864)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 864)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031674).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="B"
     gene            <1..>864
                     /gene="TED1"
                     /locus_tag="AWJ20_3644"
                     /db_xref="GeneID:30035689"
     CDS             1..864
                     /gene="TED1"
                     /locus_tag="AWJ20_3644"
                     /note="Conserved phosphoesterase domain-containing
                     protein; acts together with Emp24p/Erv25p in cargo exit
                     from the ER; deletion confers sensitivity to
                     4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO);
                     GO_component: GO:0005783 - endoplasmic reticulum [Evidence
                     IEA]; GO_component: GO:0005783 - endoplasmic reticulum
                     [Evidence IDA] [PMID 14562095]; GO_component: GO:0005789 -
                     endoplasmic reticulum membrane [Evidence IEA];
                     GO_component: GO:0016021 - integral component of membrane
                     [Evidence IEA]; GO_component: GO:0016020 - membrane
                     [Evidence IEA]; GO_function: GO:0016787 - hydrolase
                     activity [Evidence IEA]; GO_function: GO:0003674 -
                     molecular_function [Evidence ND]; GO_process: GO:0006888 -
                     ER to Golgi vesicle-mediated transport [Evidence IGI,IMP]
                     [PMID 17989219]; GO_process: GO:0008152 - metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /product="Ted1p"
                     /protein_id="XP_018738471.1"
                     /db_xref="GeneID:30035689"
                     /translation="

MGDLISSQWIGDEEFYRRADRYKSRIFTHNSYSQNEPVFINISGNHDVGYNGEMTYERVNRYEQIYGKMNYVVETPATNDHPSWRFVVINSLSLDGPALEPKFQQDTLQFIESISESNFNGPTVLFSHVPLYKEEGICRDSTYFNYYSWGTLREQNHLSQESSQLLLNSVFKPGNPYGGVILTGHDHEGCITDYLYNTETEEWLSTPAVSRKAASPSVREITVRSMMGEYGGNGGLLTGHFDANSATWYFYFNLCSLGVQHIWWATKITTYISIALTTLWIILTFVN"

     misc_feature    <1..693
                     /gene="TED1"
                     /locus_tag="AWJ20_3644"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; Region: MPP_superfamily; cl13995"
                     /db_xref="CDD:449317"
     misc_feature    <124..>435
                     /gene="TED1"
                     /locus_tag="AWJ20_3644"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; Region: MPP_superfamily; cl13995"
                     /db_xref="CDD:449317"
ORIGIN      

atgggtgatttaatatctagccaatggataggagacgaagagttttacaggcgagctgatcgatacaaaagccggatatttacacacaattcctatagtcagaatgagcctgtttttatcaacataagcgggaatcatgacgttggatataatggagagatgacatacgagagagtgaacagatatgaacagatttatggaaagatgaactatgttgtcgagacaccagcgacaaacgatcatcctagctggaggtttgttgtgataaactcgttgtcactggacggcccagctttagaaccaaaatttcaacaggatacattgcaattcatagaatctatctcagaatcgaatttcaatggtccaactgtgctgtttagccacgtgccactatacaaagaagaaggtatctgtagagactcgacgtatttcaattactactcttggggaacattacgagaacaaaatcatctttctcaggaatcttctcaactgttactaaactcagtattcaaaccaggtaacccttatggaggagttatactcactgggcacgatcacgaaggttgcattactgactacttgtacaatacagaaactgaagagtggttatctacaccagctgtgagcaggaaagctgcttctccaagtgtacgagaaatcacagtccgcagcatgatgggagagtatggagggaacggtggtcttctgaccggtcactttgatgctaactcggcaacgtggtatttctactttaatctgtgctcactcggtgtacaacatatttggtgggccactaaaataaccacttacatcagtatagcacttaccactctgtggatcattttaacatttgtaaattaa

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