LOCUS       XM_018880610             924 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Dre2p (DRE2), partial mRNA.
ACCESSION   XM_018880610
VERSION     XM_018880610.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Trichomonascaceae;
            Sugiyamaella.
REFERENCE   1  (bases 1 to 924)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 924)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 924)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031674).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="B"
     gene            <1..>924
                     /gene="DRE2"
                     /locus_tag="AWJ20_3580"
                     /db_xref="GeneID:30035618"
     CDS             1..924
                     /gene="DRE2"
                     /locus_tag="AWJ20_3580"
                     /note="Component of the cytosolic Fe-S protein assembly
                     (CIA) machinery; contains an Fe-S cluster that receives
                     electrons from NADPH via the action of Tah18pin an early
                     step in the CIA pathway; ortholog of human Ciapin1;
                     protein abundance increases in response to DNA replication
                     stress; GO_component: GO:0005737 - cytoplasm [Evidence
                     IEA,IEA,IEA,IEA]; GO_component: GO:0005737 - cytoplasm
                     [Evidence IDA] [PMID 14562095]; GO_component: GO:0005829 -
                     cytosol [Evidence IDA] [PMID 18625724]; GO_component:
                     GO:0005758 - mitochondrial intermembrane space [Evidence
                     IEA,IEA]; GO_component: GO:0005758 - mitochondrial
                     intermembrane space [Evidence IDA] [PMID 18625724];
                     GO_component: GO:0005739 - mitochondrion [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA,IEA]; GO_function: GO:0009055 - electron
                     carrier activity [Evidence IEA]; GO_function: GO:0009055 -
                     electron carrier activity [Evidence IMP] [PMID 20802492];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA,IEA]; GO_function: GO:0046872 - metal ion
                     binding [Evidence IEA]; GO_process: GO:0006915 - apoptotic
                     process [Evidence IEA,IEA]; GO_process: GO:0010421 -
                     hydrogen peroxide-mediated programmed cell death [Evidence
                     IEA]; GO_process: GO:0016226 - iron-sulfur cluster
                     assembly [Evidence IEA,IEA]; GO_process: GO:0016226 -
                     iron-sulfur cluster assembly [Evidence IMP] [PMID
                     18625724]; GO_process: GO:0016226 - iron-sulfur cluster
                     assembly [Evidence IMP] [PMID 20802492]; GO_process:
                     GO:0043066 - negative regulation of apoptotic process
                     [Evidence IEA]"
                     /codon_start=1
                     /product="Dre2p"
                     /protein_id="XP_018738413.1"
                     /db_xref="GeneID:30035618"
                     /translation="

MTADQTETATLLILSSDIVKNPDQVQEQINNLSTESQVFHHQLLERITTKTIELTRNFYSHIHIADATGKSVALDDNTADLLFGCARNGCRLTGQIDGSPQSSLPLLLAGFIKESDLFVKPAREPATGVPTVASISLKKKTNGASKSSLPQFKRLHPTSVASADPASSVVKLNLDLDDDDELIDENDLMSDESSLPAAIVIPAKCDPGPGRKRRKACKDCTCGLKEVEEQELEEQEKKLQEVASKNVVTLGSDDMAEIDFTVPGKAVGGCGSCALGDAFRCDGCPYLGLPPFKPGEIVSIGFGRDDL"

     misc_feature    28..390
                     /gene="DRE2"
                     /locus_tag="AWJ20_3580"
                     /note="Fe-S cluster assembly protein DRE2 N-terminus;
                     Region: DRE2_N; pfam16803"
                     /db_xref="CDD:435591"
     misc_feature    595..900
                     /gene="DRE2"
                     /locus_tag="AWJ20_3580"
                     /note="Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
                     biogenesis; Region: CIAPIN1; pfam05093"
                     /db_xref="CDD:398662"
ORIGIN      

atgaccgctgatcaaacggaaacagctacactgctgattctatcgtcggatatagtgaagaatccagatcaggtccaagaacaaatcaataacctatcaacggagtcacaggtgttccatcatcaactgctggagagaatcacaacgaagactattgaactgactaggaacttttattcccatattcatatcgctgatgctactggaaaatcggttgctctcgatgataacactgctgatttactttttggatgtgctagaaatggatgtagattaactggccagatcgatggttcccctcagtcgtctcttcctttgcttttagcaggctttataaaagaatctgacctgtttgtgaagccagccagagaaccagcgaccggtgtaccaacggtagcatcgatctctttaaagaagaaaaccaacggtgcctcaaaatcgtcacttcctcagtttaaaagattgcatcctacttctgtagcttctgcggaccctgcctcatctgttgtcaaactgaatcttgatctcgacgatgatgatgagcttatcgatgagaatgatcttatgagtgacgagtcttctctcccagcggctattgtgattcctgcaaaatgtgatccaggcccaggtagaaagcgccgaaaggcttgtaaggactgtacttgtggtctcaaggaagttgaagagcaggagttagaagagcaagaaaagaagttgcaagaggttgccagcaagaatgtggttactcttggatcggatgatatggctgagattgatttcactgtccctggaaaggcagtaggaggatgtggtagttgtgctttgggcgacgcatttagatgtgacggttgcccttacttgggccttccaccttttaagcctggtgaaatagttagcattgggtttggacgagacgatttataa

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