LOCUS       XM_018880366             840 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Zn(2+) transporter YKE4 (YKE4), partial
            mRNA.
ACCESSION   XM_018880366
VERSION     XM_018880366.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Trichomonascaceae;
            Sugiyamaella.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 840)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 840)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031674).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="B"
     gene            <1..>840
                     /gene="YKE4"
                     /locus_tag="AWJ20_3354"
                     /db_xref="GeneID:30035367"
     CDS             1..840
                     /gene="YKE4"
                     /locus_tag="AWJ20_3354"
                     /inference="similar to AA sequence:KEGG_Orthology:K14713"
                     /note="Zinc transporter; localizes to the ER; null mutant
                     is sensitive to calcofluor white, leads to zinc
                     accumulation in cytosol; ortholog of the mouse KE4 and
                     member of the ZIP (ZRT, IRT-like Protein) family;
                     GO_component: GO:0005783 - endoplasmic reticulum [Evidence
                     IEA]; GO_component: GO:0005783 - endoplasmic reticulum
                     [Evidence IDA] [PMID 16760462]; GO_component: GO:0005789 -
                     endoplasmic reticulum membrane [Evidence IEA];
                     GO_component: GO:0016021 - integral component of membrane
                     [Evidence IEA]; GO_component: GO:0016021 - integral
                     component of membrane [Evidence ISM] [PMID 12192589];
                     GO_component: GO:0016020 - membrane [Evidence IEA,IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA]; GO_function:
                     GO:0005385 - zinc ion transmembrane transporter activity
                     [Evidence IMP] [PMID 16760462]; GO_process: GO:0006811 -
                     ion transport [Evidence IEA]; GO_process: GO:0030001 -
                     metal ion transport [Evidence IEA]; GO_process: GO:0055085
                     - transmembrane transport [Evidence IEA]; GO_process:
                     GO:0006810 - transport [Evidence IEA]; GO_process:
                     GO:0006829 - zinc ion transport [Evidence IEA];
                     GO_process: GO:0006829 - zinc ion transport [Evidence IMP]
                     [PMID 16760462]"
                     /codon_start=1
                     /product="Zn(2+) transporter YKE4"
                     /protein_id="XP_018738192.1"
                     /db_xref="GeneID:30035367"
                     /translation="

MGFLLFVVIDKTMRVFSGQNGHSHGHDHSHAHDHCHSQKSKHEKESEQTLENIAIASGSKKSSSISSIKKRNKSETDESKKRDQTFEEEARHRESAVSNPSTSATLSAYLNMIADFSHNITDGLAMSASFYVGQNIGASNCFAMFWHEAPHQVGDFVLLLQGGFSKKKALKAQFVTVFGAYLGTMIGIALNSFALPFATNAETARASVAPGIFGSNVMISDLMLPFSTGAFLYIATVGILPEVLHSEEDVNTTKMGHAVKCIFQLVSALGGLYIMFILS"

     misc_feature    <1..834
                     /gene="YKE4"
                     /locus_tag="AWJ20_3354"
                     /note="ZIP Zinc transporter; Region: Zip; pfam02535"
                     /db_xref="CDD:396884"
ORIGIN      

atgggctttctgttatttgttgttattgataagactatgagggtttttagtggccaaaatggacatagtcatggtcatgatcatagccatgctcacgaccattgccatagccaaaagagcaagcatgaaaaagaatcagaacaaaccttggaaaatattgcaattgcttcgggtagcaagaagtcaagctctatatcatcgattaaaaagagaaataaaagtgaaacagatgagtccaaaaaaagggatcaaacttttgaagaagaggctaggcatagagagtcagcggtgtctaatccaagcacttcggcaacattatctgcttatttaaacatgatagctgacttttcacacaatatcacagatggactcgctatgtcagcatcattctacgttggccaaaatattggtgcttcgaattgctttgcaatgttctggcatgaggctccacatcaagttggtgattttgttcttctgttacagggaggctttagtaaaaagaaagcgttaaaggctcagtttgtcacagtgtttggtgcctaccttgggactatgattgggatcgccttgaactcttttgcattaccatttgcgactaacgctgaaactgcgcgggcgtctgttgcgcctggtatatttggttccaatgtgatgatcagtgatctcatgctgccattttcaactggcgcttttctctacattgccactgtgggcattcttccggaagtccttcatagtgaagaggatgtaaatactactaaaatggggcatgccgttaaatgcatatttcaacttgtttctgcattaggtggtttatatataatgttcatattgtcgtaa

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