2024-05-04 02:25:52, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_018878141 1629 bp mRNA linear PLN 07-JAN-2024 DEFINITION Sugiyamaella lignohabitans Are2p (ARE2), partial mRNA. ACCESSION XM_018878141 VERSION XM_018878141.1 DBLINK BioProject: PRJNA342695 BioSample: SAMN04417247 KEYWORDS RefSeq. SOURCE Sugiyamaella lignohabitans ORGANISM Sugiyamaella lignohabitans Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Trichomonascaceae; Sugiyamaella. REFERENCE 1 (bases 1 to 1629) AUTHORS Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M., Marx,H. and Mattanovich,D. TITLE Complete genome sequence and transcriptome regulation of the pentose utilising yeast Sugiyamaella lignohabitans JOURNAL Unpublished REFERENCE 2 (bases 1 to 1629) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-JAN-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1629) AUTHORS Peymann,A. and Graf,A. TITLE Direct Submission JOURNAL Submitted (18-FEB-2016) Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna 1190, Austria COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_031672). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1629 /organism="Sugiyamaella lignohabitans" /mol_type="mRNA" /strain="CBS 10342" /type_material="culture from holotype of Candida lignohabitans" /db_xref="taxon:796027" /chromosome="A" gene <1..>1629 /gene="ARE2" /locus_tag="AWJ20_1276" /db_xref="GeneID:30033060" CDS 1..1629 /gene="ARE2" /locus_tag="AWJ20_1276" /inference="similar to AA sequence:KEGG_Orthology:K00637" /note="Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the presence of oxygen; ARE2 has a paralog, ARE1, that arose from the whole genome duplication; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO_component: GO:0005783 - endoplasmic reticulum [Evidence IDA] [PMID 10672016]; GO_component: GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence IEA]; GO_component: GO:0016021 - integral component of membrane [Evidence ISM] [PMID 12192589]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0008374 - O-acyltransferase activity [Evidence IEA]; GO_function: GO:0034736 - cholesterol O-acyltransferase activity [Evidence IEA]; GO_function: GO:0034737 - ergosterol O-acyltransferase activity [Evidence IGI,IMP] [PMID 10672016]; GO_function: GO:0016740 - transferase activity [Evidence IEA]; GO_function: GO:0016746 - transferase activity, transferring acyl groups [Evidence IEA]; GO_process: GO:0008204 - ergosterol metabolic process [Evidence IGI,IMP] [PMID 10672016]" /codon_start=1 /product="Are2p" /protein_id="XP_018735475.1" /db_xref="GeneID:30033060" /translation="
MARSTGVASSGRKLNGSKTDEVVSKELQTDTQSHILDPINLSEVDTDLRSYREHLNFDNAYDDSASSTPKLSPISEPGSVTSADMSPSALRGQTLHRRTTSSSSASSLSNGFVLSADRTSKVKQTEVHLEGSEKKVLKSINEKSATKKEHRRYSYRNLSSHSQASILDAEASRSSVFFGFYTLFWVTIAFLIVRGSIYNYIRTSQLLGTNIVDILRKDLIKIALTDVGLYLGIYFAFFWQVGIKYGILDWNQSGWIVQHIWQACYLGFVLWFNEYMQFPWIGCVFLLLHSLVLVMKQHSYAFYNGHFWSIKSELDTASAKLLRIESSNSIITPEAREVIGRLKSQMEFCSEELRLQSEKTPFPANINLKNFFDYSMFPTLVYQIEYPRTSKIRWGYVLEKTLATFGVFFLMIIVAENYLYPIAMRALALRDNTLYEKVLHYPLILMDLVPPFILIYLLVFYIIWDAILNAIAELTRFGDRQFYGEWWNCVTWDQFAKDWNTPVHRFLLRHVYHSSISSFHISKQQATCKYKLVRTWRIFYEV"
misc_feature 421..1581 /gene="ARE2" /locus_tag="AWJ20_1276" /note="membrane-bound O-acyltransferase family; Region: MBOAT; cl00738" /db_xref="CDD:445070" ORIGIN
atggcccgatcaacaggagtggcctccagtgggcgaaagctaaatggaagtaaaactgatgaagtggtttccaaagaattgcaaacagacacacagagtcatatattagatccgatcaatttgagtgaagtggacactgacctcaggagctacagggagcatctcaattttgataacgcttatgatgacagtgcatcatctacacctaaattatcgcctatatccgagccgggctcagttacttcggctgatatgtctccaagtgcccttcgtggtcaaactttacatcggcgtacaacatcaagctcatctgcttcttcgttaagtaatggatttgttctgagtgctgatcgtacatcgaaggtgaaacaaactgaagttcacttggaaggtagtgagaaaaaagttctcaaatctatcaatgaaaaatcagctactaagaaagagcataggagatatagctatcggaacctgagtagccattcacaggccagtattctggatgctgaagctagtcggtcgtctgttttttttggcttctatacacttttttgggtgactatagcttttctgattgtcagaggctcaatttacaactacatacggacttcacaattactaggtacaaatattgtcgatattttacggaaagacttgattaagattgctctgaccgatgttggtttatatttgggtatctattttgcatttttttggcaggttggaatcaaatatggcattttggattggaatcagtctggttggattgtacaacatatatggcaggcctgctatttaggctttgttctatggtttaatgaatatatgcagttcccttggattggttgtgtatttcttctacttcattctttagtcctggttatgaaacagcactcatatgcattttataatggccacttttggtctataaagtccgagttggatactgcctctgccaaactactaaggattgaatcttctaattccataataacaccagaagccagagaggttatcggtagactcaagtcacagatggaattctgttctgaagaattgcgtttgcaatctgagaagacaccattcccagcaaacatcaatctcaaaaacttttttgattacagtatgtttcctacactggtttaccaaatcgagtatccaagaacatcaaaaataagatggggatatgtactcgaaaagaccttggcaacatttggagtgttcttcctgatgattattgtggctgaaaactacctttatccgatagccatgcgggctcttgctctccgtgacaatacgttgtatgagaaggttttacactatccgctgattctaatggatcttgtcccaccattcatattgatatatttgctagtgttttacattatctgggatgcaattctcaatgctattgctgagttgaccagatttggagatcgtcaattctatggggaatggtggaattgcgttacctgggatcaattcgccaaggattggaatacgcctgtccaccgcttcctacttcgccatgtttatcacagcagcatctcgtctttccatatatcgaagcagcaggcaacctgtaagtataaattagtacggacgtggcgtattttttatgaagtttga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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