2024-04-19 10:10:57, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_018168289 384 bp mRNA linear INV 29-APR-2022 DEFINITION PREDICTED: Hyalella azteca cornifin-B-like (LOC108679632), mRNA. ACCESSION XM_018168289 VERSION XM_018168289.1 DBLINK BioProject: PRJNA342675 KEYWORDS RefSeq; includes ab initio. SOURCE Hyalella azteca ORGANISM Hyalella azteca Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Peracarida; Amphipoda; Senticaudata; Talitrida; Talitroidea; Hyalellidae; Hyalella. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_025933300) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Hyalella azteca Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..384 /organism="Hyalella azteca" /mol_type="mRNA" /isolate="HAZT.00-mixed" /db_xref="taxon:294128" /chromosome="Unknown" /tissue_type="whole organism" gene 1..384 /gene="LOC108679632" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108679632" CDS 1..384 /gene="LOC108679632" /codon_start=1 /product="cornifin-B-like" /protein_id="XP_018023778.1" /db_xref="GeneID:108679632" /translation="
MAAFRVNAPGYPPAIETDYPPAIETDYPPATEPAHPPATETAHPPATETAHPPATETAHPPATETAHPPATETAHPPATETAHPPATETDYSPATETDYPTATETDYPPATGTGQISIAVYTLQRTC"
misc_feature 49..>309 /gene="LOC108679632" /note="multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Region: kgd; PRK12270" /db_xref="CDD:237030" ORIGIN
atggcagcattccgcgtcaatgctcccggttatcctcctgccattgaaactgattatcctcctgccattgaaactgattatcctccggccactgagcctgctcatcctcctgccactgaaactgctcatcctcctgccactgaaactgctcatcctcctgccactgaaactgctcatcctcctgccactgagactgctcaccctcctgctactgagactgctcatcctcctgccactgagactgctcatcctcctgccactgaaactgattattctcctgccaccgaaactgattatcctactgccactgaaactgattatcctcctgccactggaactggtcagatttctattgctgtatacacgctacaacgaacttgctga
//
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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