2024-04-27 06:21:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_017933426 252 bp mRNA linear INV 26-AUG-2016 DEFINITION PREDICTED: Habropoda laboriosa broad-complex core protein isoforms 1/2/3/4/5-like (LOC108571402), mRNA. ACCESSION XM_017933426 VERSION XM_017933426.1 DBLINK BioProject: PRJNA339959 KEYWORDS RefSeq. SOURCE Habropoda laboriosa ORGANISM Habropoda laboriosa Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Habropoda. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017100229.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Habropoda laboriosa Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..252 /organism="Habropoda laboriosa" /mol_type="mRNA" /isolate="0110345459" /db_xref="taxon:597456" /chromosome="Unknown" /collection_date="2011-04-02" gene 1..252 /gene="LOC108571402" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:108571402" CDS 1..252 /gene="LOC108571402" /codon_start=1 /product="broad-complex core protein isoforms 1/2/3/4/5-like" /protein_id="XP_017788915.1" /db_xref="GeneID:108571402" /translation="
MTGLTLNSLNTQSAKKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSRPGDIDIKFF"
misc_feature 58..120 /gene="LOC108571402" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(58..60,67..69,106..108,118..120) /gene="LOC108571402" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:275368" misc_feature 148..210 /gene="LOC108571402" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN
atgacggggctgaccttgaactctctgaacacccagtcagcgaagaagctgttcacctgccagctgtgcggcaaggtgctatgcagcaaagcatccctgaaacgccacgttgccgacaagcacgccgagcgacaggaggagtacagatgcgtcatctgcgagcgggtttactgctcgcgtaactccctgatgacccacatatatacctatcataagagcagacccggcgacattgacattaagttcttttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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