2024-04-29 14:36:59, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_017774672 1101 bp mRNA linear PLN 20-JAN-2023 DEFINITION PREDICTED: Gossypium arboreum uncharacterized LOC108473113 (LOC108473113), mRNA. ACCESSION XM_017774672 VERSION XM_017774672.2 DBLINK BioProject: PRJNA907401 KEYWORDS RefSeq. SOURCE Gossypium arboreum ORGANISM Gossypium arboreum Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_069080) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jan 20, 2023 this sequence version replaced XM_017774672.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_025698485.1-RS_2022_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1101 /organism="Gossypium arboreum" /mol_type="mRNA" /isolate="Shixiya-1" /db_xref="taxon:29729" /chromosome="11" /tissue_type="leaf" /genotype="A2" gene 1..1101 /gene="LOC108473113" /note="uncharacterized LOC108473113; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins" /db_xref="GeneID:108473113" CDS 200..916 /gene="LOC108473113" /codon_start=1 /product="uncharacterized protein LOC108473113" /protein_id="XP_017630161.1" /db_xref="GeneID:108473113" /translation="
MDSFYFHNVKTEKVKAMKKYNRLQSIAKVFRIFEVLSALLFLAWTAERVPFAIKISGEFVLKLGGIIASPFFVFLICNLIIITLIAKSGIFSAVRNADSKVCEEIIIKTADTHSKSVSQEEIVYQDKEIISEVNTSTRECEDMEPELEPESDSDFEADNRRVYRRSKSEKLEREKVKKELRRSESEKKCQKIENLDEKLFPEDDLSNEEFQRAIEDFIAKQLRFRREESLSIVLQSQA"
polyA_site 1101 /gene="LOC108473113" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
cgattgaaaaggaggagaaacctcactgctcttacactgcgactccaaaaccgtaccccctctctccatcctttttcaaatccggcatttattttcccggaaagttgaaaaccagtttccacggaaccaaacgaaacttttgaaactttccaaattcctatcggttttcaccgttgaatgcctcggaaacgttgctgttatggattccttttatttccataacgtgaaaacagagaaagttaaggcgatgaagaaatacaatcgtcttcaaagcatagcaaaggtgtttcgtatttttgaagtgctttcggctttgctgtttttggcgtggactgccgagcgcgtgccttttgccatcaaaatctccggcgagtttgttttgaaactcggcggcatcatcgccagtccgttcttcgttttcctcatctgtaacctcatcatcatcactctaattgctaagtccggtatcttctccgccgttcgcaatgccgattccaaagtctgcgaggaaataatcatcaagaccgcagacactcactccaaatcggtgtctcaagaagagattgtgtatcaagataaggagatcatctctgaagtgaacacatctactcgcgagtgcgaagacatggaaccagaactggagccagagtcagactctgactttgaagccgataatcggagagtgtataggagaagtaaatcggagaagttggaaagggagaaagtgaaaaaggaactacgacgatcggagagcgagaagaaatgccaaaaaattgaaaacctggacgaaaaattatttcctgaagacgatttgagcaatgaagagtttcaacgagcgatcgaagactttattgctaaacagttgaggtttcgccgagaagagtctctgtctattgttcttcaaagccaagcttgaaaaaaaagagttttctttttagaaaagtttaaccaccaaaaaaaggaaaatggctatttactggactgttttcttttttatctgtttaaaaaaaaaaaaaacgctaatagcctggttatgttatgctgtacagtggtacaacgacaatggaggaactggtaactaccatcatttttgttaacaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]