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2024-04-29 14:36:59, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_017774672            1101 bp    mRNA    linear   PLN 20-JAN-2023
DEFINITION  PREDICTED: Gossypium arboreum uncharacterized LOC108473113
            (LOC108473113), mRNA.
ACCESSION   XM_017774672
VERSION     XM_017774672.2
DBLINK      BioProject: PRJNA907401
KEYWORDS    RefSeq.
SOURCE      Gossypium arboreum
  ORGANISM  Gossypium arboreum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_069080) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 20, 2023 this sequence version replaced XM_017774672.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_025698485.1-RS_2022_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gossypium arboreum"
                     /mol_type="mRNA"
                     /isolate="Shixiya-1"
                     /db_xref="taxon:29729"
                     /chromosome="11"
                     /tissue_type="leaf"
                     /genotype="A2"
     gene            1..1101
                     /gene="LOC108473113"
                     /note="uncharacterized LOC108473113; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3 long
                     SRA reads, 2 Proteins"
                     /db_xref="GeneID:108473113"
     CDS             200..916
                     /gene="LOC108473113"
                     /codon_start=1
                     /product="uncharacterized protein LOC108473113"
                     /protein_id="XP_017630161.1"
                     /db_xref="GeneID:108473113"
                     /translation="
MDSFYFHNVKTEKVKAMKKYNRLQSIAKVFRIFEVLSALLFLAWTAERVPFAIKISGEFVLKLGGIIASPFFVFLICNLIIITLIAKSGIFSAVRNADSKVCEEIIIKTADTHSKSVSQEEIVYQDKEIISEVNTSTRECEDMEPELEPESDSDFEADNRRVYRRSKSEKLEREKVKKELRRSESEKKCQKIENLDEKLFPEDDLSNEEFQRAIEDFIAKQLRFRREESLSIVLQSQA"
     polyA_site      1101
                     /gene="LOC108473113"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
cgattgaaaaggaggagaaacctcactgctcttacactgcgactccaaaaccgtaccccctctctccatcctttttcaaatccggcatttattttcccggaaagttgaaaaccagtttccacggaaccaaacgaaacttttgaaactttccaaattcctatcggttttcaccgttgaatgcctcggaaacgttgctgttatggattccttttatttccataacgtgaaaacagagaaagttaaggcgatgaagaaatacaatcgtcttcaaagcatagcaaaggtgtttcgtatttttgaagtgctttcggctttgctgtttttggcgtggactgccgagcgcgtgccttttgccatcaaaatctccggcgagtttgttttgaaactcggcggcatcatcgccagtccgttcttcgttttcctcatctgtaacctcatcatcatcactctaattgctaagtccggtatcttctccgccgttcgcaatgccgattccaaagtctgcgaggaaataatcatcaagaccgcagacactcactccaaatcggtgtctcaagaagagattgtgtatcaagataaggagatcatctctgaagtgaacacatctactcgcgagtgcgaagacatggaaccagaactggagccagagtcagactctgactttgaagccgataatcggagagtgtataggagaagtaaatcggagaagttggaaagggagaaagtgaaaaaggaactacgacgatcggagagcgagaagaaatgccaaaaaattgaaaacctggacgaaaaattatttcctgaagacgatttgagcaatgaagagtttcaacgagcgatcgaagactttattgctaaacagttgaggtttcgccgagaagagtctctgtctattgttcttcaaagccaagcttgaaaaaaaagagttttctttttagaaaagtttaaccaccaaaaaaaggaaaatggctatttactggactgttttcttttttatctgtttaaaaaaaaaaaaaacgctaatagcctggttatgttatgctgtacagtggtacaacgacaatggaggaactggtaactaccatcatttttgttaacaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]