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Previous release (v1)
2025-10-24 20:08:05, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_017558171 1998 bp mRNA linear PLN 28-DEC-2022
DEFINITION PREDICTED: Vigna angularis protein NETWORKED 4B (LOC108325156),
transcript variant X1, mRNA.
ACCESSION XM_017558171
VERSION XM_017558171.2
DBLINK BioProject: PRJNA911773
KEYWORDS RefSeq.
SOURCE Vigna angularis (adzuki bean)
ORGANISM Vigna angularis
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
Phaseoleae; Vigna.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_068972) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On Dec 28, 2022 this sequence version replaced XM_017558171.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_016808095.1-RS_2022_12
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1998
/organism="Vigna angularis"
/mol_type="mRNA"
/cultivar="LongXiaoDou No.4"
/db_xref="taxon:3914"
/chromosome="3"
/tissue_type="leaf"
/dev_stage="squaring stage"
/geo_loc_name="China: Harbin, Heilongjiang"
gene 1..1998
/gene="LOC108325156"
/note="protein NETWORKED 4B; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 5 long
SRA reads, 1 Protein"
/db_xref="GeneID:108325156"
CDS 135..1826
/gene="LOC108325156"
/codon_start=1
/product="protein NETWORKED 4B"
/protein_id="XP_017413660.1"
/db_xref="GeneID:108325156"
/translation="
MMKNQPSQWWWLESHSNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQIAGIRQQKTGGSPFSPLKHHQPEKLISFANDCYDSYSESCDVEESGESEIDDPEQEEEEDSIFNNCAQLEEVQFERLGEENKDHKGQNKQKYNIYEAVMLREEIEQLRKENRVQKDELDRKSITFVELMMLREEIEQLRKENRAQKDELNQKDIICGEAMMLREEIEQLGKENRVLKDELSQKSIICGEVMMLREEIEQFRKENRTQKHELNQKDIICGKAMMPREEIEQLSKENRVMKDELNQKSIICGEVMMLKEEIEQLRKENRAQKDELHQKDNICSEIMMLREEIGQLGKENAALKDELNKKYIICGEIMMLREEIEQLRKYNRGQKNELHQKGIKCEVTMSREEKENRVKNDELNPEDSVCGEVVMLREEIKRLEKDERAQKGTLSGEVMKLRQENSAQKDHLKQKDQEKIEVIRHLSLAIDMLKQENIRMRSFIAKESSNKWKNPFGLKNFMGSLSEQLFNGITNNQPSLVAL"
misc_feature 159..380
/gene="LOC108325156"
/note="KIP1-like protein; Region: KIP1; pfam07765"
/db_xref="CDD:429647"
misc_feature <669..>1541
/gene="LOC108325156"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:274008"
polyA_site 1998
/gene="LOC108325156"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
atataaaatggttctattctaatctcttgctcttcgtgaactctaattccatcgcaggcggtggtggcaagcattgcattaattcatgctcttggtgttcgtgataacatagacaactgaggaggagggctaaaatgatgaagaatcaaccgtcacagtggtggtggcttgagagccacagtaacacaagacgatccccttggcttcaatccactctcacagagctaaatgagaagacaaaggcaatgttaaaactaattgaagaagatgcagattcctttgcccaacgtgctgagatgtattacaagaagagaccacaacttgtgagcatggttgaagacttctataggacacatcgatcattagctgagcggtatgatcaaatcgctggaattcgtcagcagaagactggagggtcccccttttctccactcaagcatcatcaaccagagaagttgataagttttgcgaatgactgttatgatagctattctgagagttgtgatgtagaggagtctggggaatctgaaattgatgatcctgagcaagaagaggaagaggattccatattcaataactgtgcacaactggaggaagttcagtttgagagacttggtgaagagaacaaggatcataagggtcagaacaagcaaaaatataacatttacgaagcagtgatgttgagggaagaaatagagcaactcagaaaagagaacagggttcagaaggatgaactcgaccggaaaagcatcacttttgttgaattaatgatgctgagggaagaaatagagcaactaagaaaagagaatagagcacagaaggatgaactcaaccagaaagatatcatttgtggtgaagcaatgatgttgagggaagaaatagaacaactcggtaaagaaaatagagttctgaaggatgaactaagccagaaaagtatcatttgtggtgaagtaatgatgttgagggaagaaatagagcaattcagaaaagagaatagaacgcagaagcatgaactcaaccagaaagatatcatttgtggtaaagcaatgatgccgagggaagaaatagagcaactcagtaaagagaatagagttatgaaggatgaactaaaccagaaaagtatcatttgtggtgaagtaatgatgttgaaggaagaaatagagcaactcaggaaagagaatagagcgcagaaggatgaactccaccagaaagacaacatttgcagtgaaataatgatgttgagggaagaaatagggcaattgggaaaagagaatgcagcgctgaaggatgaactcaacaagaaatatatcatttgtggagaaataatgatgttgagggaagaaatagaacaactcaggaaatataatagagggcagaagaatgaactccaccagaaaggtatcaagtgtgaagtaacgatgtcgagggaagaaaaagagaatagagtgaagaatgatgaactaaacccagaagatagcgtttgtggtgaagtagtgatgttaagggaagaaataaaacgacttgaaaaagatgaaagagcacaaaaaggtaccctttctggtgaagtaatgaagttaaggcaggagaatagcgcgcagaaggaccatcttaagcaaaaagaccaagagaaaatagaggtgataagacacctgagtttagctatagatatgctgaagcaggagaacataaggatgagaagcttcattgctaaggaatcttccaacaaatggaagaatccatttgggttaaagaatttcatgggatcattatcagagcagttgtttaatggaattacaaataatcaacctagtcttgtagctctctagataaggttcacagagtaaataactaagttttgtagaacaatattaaaagatacctatgtacatgttatggggacctgctcaagtaacctacagatcttgtatacagtttagtatattcctaactaatccaagaccgagtatctagtggatttcctagacacttgtttttcta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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