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2024-05-17 14:03:10, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_015897909            2535 bp    mRNA    linear   INV 14-MAR-2016
DEFINITION  PREDICTED: Acropora digitifera uncharacterized LOC107333148
            (LOC107333148), transcript variant X3, mRNA.
ACCESSION   XM_015897909
VERSION     XM_015897909.1
DBLINK      BioProject: PRJNA314803
KEYWORDS    RefSeq.
SOURCE      Acropora digitifera
  ORGANISM  Acropora digitifera
            Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
            Astrocoeniina; Acroporidae; Acropora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_015441102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Acropora digitifera Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Acropora digitifera"
                     /mol_type="mRNA"
                     /db_xref="taxon:70779"
                     /chromosome="Unknown"
                     /country="Japan:Okinawa, Kunigami, Oku"
     gene            1..2535
                     /gene="LOC107333148"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     4 samples with support for all annotated introns"
                     /db_xref="GeneID:107333148"
     CDS             168..2360
                     /gene="LOC107333148"
                     /codon_start=1
                     /product="uncharacterized protein LOC107333148 isoform X3"
                     /protein_id="XP_015753395.1"
                     /db_xref="GeneID:107333148"
                     /translation="
MARIFRRAANKVINFRDGHESIGLLISDEKVVYESFQKVVMAQMDESISLLKWAKCEENQAIQDVFSKAFEVSSMWTSSWRDFNQEYYLYRKTFKEVLKEERVLDEARKRQAMHTTKLNRLQKQLEQSKRKSYTGKYSSLASEIAEVTLQVEKGQAELEVKTTKLEIVKAKKLRESMLQISNGLNQWASKTLLVAEAYSKLANLIPDTPTQVSERKIFHGTVESRNIVNNLASDLVIDPELSQQLKDMSHSAQCNLYAVSTPILPAQQNGVKCNHVGLNSEKTVKKVNRKPVGQKGMSPQVSCLHQLNTKKMDPNFGRAQSVTDLRPPPISPPPCLPKKALAHSTSNIPSRETNNNIGWYASANVSSNSDSDSEEGYTEPYTDPSLVQRKMVWKVLSDGAINKVGRVYEDKDVATCHYTEKQSEEDLPQDNESAVYVDVIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYEKLLQDNESAVYVDCINDVVSATQTGKGVLSGGAINTVGRVYEDKDVATCHYTEKQSEEDLPQDNESAVYVDVIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYEKLLQDNESAVYVDCINDVVSATQTGKGVLQGGESALYVDLISDAESAMLSDEALPKVNESAARVS"
ORIGIN      
cgctctctctctccagccaatagcctgaactctatacttagatacgcataattgaccatttccgctgcatttctacagtaaaagtcaattattgactattagtcacaacactgtacgtacttgtgaagatatattttgtttttgtgatattttactcacataaaaaaatggccagaatcttccgtcgagctgccaataaggtgataaatttcagagacgggcacgaatccataggacttctgatatcagacgaaaaagtggtttatgagagttttcagaaggttgtcatggcacaaatggatgagtccattagtctgctgaaatgggccaagtgtgaagaaaatcaagcgattcaggatgtattcagcaaggcttttgaagtttccagcatgtggacatcgtcgtggagagatttcaatcaagagtattacctgtataggaagactttcaaagaagttttaaaagaggagagagttttggatgaagcaagaaagaggcaagccatgcataccacaaaactgaacagacttcaaaaacagctagagcaaagtaagagaaaaagttatacaggaaaatattcttcattggcaagtgaaatagcagaggttacattacaagtagaaaagggtcaggctgaacttgaagtaaaaacaaccaagcttgaaatagtcaaggctaagaaactaagggaatccatgctgcagatatccaatggtctgaaccagtgggcatcaaaaacattgttagttgctgaagcttacagcaagctggcaaatctgattccagacactccaactcaggtttccgaacgcaagattttccatggtactgttgagtcacgcaacattgtaaacaaccttgcaagtgatctggttattgacccagagctatcgcagcagttgaaagacatgtcacattcagcacaatgcaatttatatgcagtttcgacacctatccttcctgcacagcagaatggtgtcaaatgcaatcacgtgggcctcaacagtgagaaaacggttaaaaaagtaaacagaaagccagttggtcaaaaggggatgtcaccacaagtttcatgtctccaccagctcaacactaagaagatggatccaaactttggaagagcacagtctgtcactgatctaaggcctccacctatctcaccaccaccctgtcttccaaagaaagctctggctcattccacttcaaatataccttcacgagagaccaataataacattggatggtatgcaagtgcaaatgtttcaagcaattcagattctgacagcgaagaaggctacacagaaccctacactgacccttcattagtgcagagaaagatggtttggaaagtgttaagtgatggagcaataaacaaagttggaagagtttatgaggacaaagacgtggcaacgtgtcattacacggaaaaacagtctgaggaggatttgccgcaagacaatgaatcagcagtttatgttgatgttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatgaaaaattgttgcaagacaatgaatcagcagtttatgttgactgcatcaatgatgtggtaagcgcaacacagactggcaaaggtgtgttaagtggtggagcaataaacacagttggaagagtttatgaggacaaagacgtggcaacgtgtcattacacggaaaaacagtctgaggaggatttgccgcaagacaatgaatcagcggtttatgttgatgttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatgaaaaattgttgcaagacaatgaatcagccgtttatgttgactgcatcaatgatgtggtaagcgcaacacagactggcaaaggtgtgttgcaaggtggtgaatcagcactctatgttgatctcattagcgacgcagaaagtgcaatgctgtctgatgaggcgttgccgaaagtcaatgaatctgccgctcgtgtatcttgaaccaagtatgacacaataacataattttatcgttcaatctaacaaactgcctgtcagctaaaaggtaataaataatattttaattgaagtagtttttatatcattttttttacttgaaatgaagttatagaagttataagagctacgtgcgtatagaaggtacatatgtgacaca
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]