2024-05-17 15:35:20, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_015897907 2708 bp mRNA linear INV 14-MAR-2016 DEFINITION PREDICTED: Acropora digitifera uncharacterized LOC107333148 (LOC107333148), transcript variant X1, mRNA. ACCESSION XM_015897907 VERSION XM_015897907.1 DBLINK BioProject: PRJNA314803 KEYWORDS RefSeq. SOURCE Acropora digitifera ORGANISM Acropora digitifera Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015441102.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Acropora digitifera Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2708 /organism="Acropora digitifera" /mol_type="mRNA" /db_xref="taxon:70779" /chromosome="Unknown" /country="Japan:Okinawa, Kunigami, Oku" gene 1..2708 /gene="LOC107333148" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns" /db_xref="GeneID:107333148" CDS 167..2533 /gene="LOC107333148" /codon_start=1 /product="uncharacterized protein LOC107333148 isoform X1" /protein_id="XP_015753393.1" /db_xref="GeneID:107333148" /translation="
MARIFRRAANKVINFRDGHESIGLLISDEKVVYESFQKVVMAQMDESISLLKWAKCEENQAIQDVFSKAFEVSSMWTSSWRDFNQEYYLYRKTFKEVLKEERVLDEARKRQAMHTTKLNRLQKQLEQSKRKSYTGKYSSLASEIAEVTLQVEKGQAELEVKTTKLEIVKAKKLRESMLQISNGLNQWASKTLLVAEAYSKLANLIPDTPTQVSERKIFHGTVESRNIVNNLASDLVIDPELSQQLKDMSHSAQCNLYAVSTPILPAQQNGVKCNHVGLNSEKTVKKVNRKPVGQKGMSPQVSCLHQLNTKKMDPNFGRAQSVTDLRPPPISPPPCLPKKALAHSTSNIPSRETNNNIGWYASANVSSNSDSDSEEGYTEPYTDPSLVQRKMVWKVLSDGAINKVGRVYEDKDVATCHYTEKQSEEDLPQDNESAVYVDCINDVVGATQTGKGVLSDGAINKVGRVYEDKDVATCHYTEKQSEEDLPQDNESAVYVDVIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYEKLLQDNESAVYVDCINDVVSATQTGKGVLSGGAINTVGRVYEDKDVATCHYTEKQSEEDLPQDNESAVYVDVIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYIKLLQDNESAVYVDFIDDAERMKQPYEKLLQDNESAVYVDCINDVVSATQTGKGVLQGGESALYVDLISDAESAMLSDEALPKVNESAARVS"
ORIGIN
gctctctctctccagccaatagcctgaactctatacttagatacgcataattgaccatttccgctgcatttctacagtaaaagtcaattattgactattagtcacaacactgtacgtacttgtgaagatatattttgtttttgtgatattttactcacataaaaaaatggccagaatcttccgtcgagctgccaataaggtgataaatttcagagacgggcacgaatccataggacttctgatatcagacgaaaaagtggtttatgagagttttcagaaggttgtcatggcacaaatggatgagtccattagtctgctgaaatgggccaagtgtgaagaaaatcaagcgattcaggatgtattcagcaaggcttttgaagtttccagcatgtggacatcgtcgtggagagatttcaatcaagagtattacctgtataggaagactttcaaagaagttttaaaagaggagagagttttggatgaagcaagaaagaggcaagccatgcataccacaaaactgaacagacttcaaaaacagctagagcaaagtaagagaaaaagttatacaggaaaatattcttcattggcaagtgaaatagcagaggttacattacaagtagaaaagggtcaggctgaacttgaagtaaaaacaaccaagcttgaaatagtcaaggctaagaaactaagggaatccatgctgcagatatccaatggtctgaaccagtgggcatcaaaaacattgttagttgctgaagcttacagcaagctggcaaatctgattccagacactccaactcaggtttccgaacgcaagattttccatggtactgttgagtcacgcaacattgtaaacaaccttgcaagtgatctggttattgacccagagctatcgcagcagttgaaagacatgtcacattcagcacaatgcaatttatatgcagtttcgacacctatccttcctgcacagcagaatggtgtcaaatgcaatcacgtgggcctcaacagtgagaaaacggttaaaaaagtaaacagaaagccagttggtcaaaaggggatgtcaccacaagtttcatgtctccaccagctcaacactaagaagatggatccaaactttggaagagcacagtctgtcactgatctaaggcctccacctatctcaccaccaccctgtcttccaaagaaagctctggctcattccacttcaaatataccttcacgagagaccaataataacattggatggtatgcaagtgcaaatgtttcaagcaattcagattctgacagcgaagaaggctacacagaaccctacactgacccttcattagtgcagagaaagatggtttggaaagtgttaagtgatggagctataaacaaagttggaagagtttatgaggacaaagacgtggcaacgtgtcattacacggaaaaacagtctgaggaggatttgccgcaagacaatgaatcagcagtttatgttgactgcatcaatgatgtggtaggcgcaacacaaactggcaaaggtgtgttaagtgatggagcaataaacaaagttggaagagtttatgaggacaaagacgtggcaacgtgtcattacacggaaaaacagtctgaggaggatttgccgcaagacaatgaatcagcagtttatgttgatgttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatgaaaaattgttgcaagacaatgaatcagcagtttatgttgactgcatcaatgatgtggtaagcgcaacacagactggcaaaggtgtgttaagtggtggagcaataaacacagttggaagagtttatgaggacaaagacgtggcaacgtgtcattacacggaaaaacagtctgaggaggatttgccgcaagacaatgaatcagcggtttatgttgatgttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatataaaattgttgcaagacaatgaatcagcagtttatgttgattttatcgatgatgcagagagaatgaagcagccctatgaaaaattgttgcaagacaatgaatcagccgtttatgttgactgcatcaatgatgtggtaagcgcaacacagactggcaaaggtgtgttgcaaggtggtgaatcagcactctatgttgatctcattagcgacgcagaaagtgcaatgctgtctgatgaggcgttgccgaaagtcaatgaatctgccgctcgtgtatcttgaaccaagtatgacacaataacataattttatcgttcaatctaacaaactgcctgtcagctaaaaggtaataaataatattttaattgaagtagtttttatatcattttttttacttgaaatgaagttatagaagttataagagctacgtgcgtatagaaggtacatatgtgacaca
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DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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