2025-08-20 17:57:20, GGRNA.v2 : RefSeq release 230 (May, 2025)
LOCUS XM_015610152 1446 bp mRNA linear PLN 20-MAR-2020 DEFINITION Debaryomyces fabryi Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (AC631_01322), partial mRNA. ACCESSION XM_015610152 VERSION XM_015610152.1 DBLINK BioProject: PRJNA309725 BioSample: SAMN03794732 KEYWORDS RefSeq. SOURCE Debaryomyces fabryi ORGANISM Debaryomyces fabryi Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Debaryomyces. REFERENCE 1 (bases 1 to 1446) AUTHORS Tafer,H., Sterflinger,K. and Lopandic,K. TITLE Draft Genome of Debaryomyces fabryi CBS 789T, Isolated from a Human Interdigital Mycotic Lesion JOURNAL Genome Announc 4 (1), e01580-15 (2016) PUBMED 26847909 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1446) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-MAR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1446) AUTHORS Tafer,H. and Lopandic,K. TITLE Direct Submission JOURNAL Submitted (06-NOV-2015) Department for Biotechnology, University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, Vienna 1190, Austria COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_015385443). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1446 /organism="Debaryomyces fabryi" /mol_type="mRNA" /strain="CBS 789" /culture_collection="CBS:789" /type_material="culture from type material of Debaryomyces fabryi" /db_xref="taxon:58627" /chromosome="Unknown" /geo_loc_name="Germany: Dortmund" /lat_lon="51.5167 N 7.4500 E" /collection_date="1998" /collected_by="C.P. Kurtzman" gene <1..>1446 /locus_tag="AC631_01322" /db_xref="GeneID:26838331" CDS 1..1446 /locus_tag="AC631_01322" /codon_start=1 /product="Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase" /protein_id="XP_015469059.1" /db_xref="GeneID:26838331" /db_xref="GO:0005783" /db_xref="GO:0016021" /db_xref="GO:0016758" /db_xref="InterPro:IPR007873" /db_xref="PFAM:PF05208" /translation="
MPEQDTKEVKRPELPPFTLRNVLMDIYNGVLALFTDPFCTRIVCPVVIVLTSLLSKAIIYNVPYTEIDFKTYIQQIQIINDGELDYSLVKGDTGQIVYPAGFVQIYQVLNWLTEEGTDIHAGQTLFGYLLALTNFLVIIVYTMTPNFQPWPVYLLLLSKRLFSIYVLRLFNDCFTTVCMISVTILLQQAAYWYKKGGSSISFLLTIVAADLYSIAISIKMNALLYLPGFLIVAYFLCGENLFKFGAVLLVIPIVQVLTGWKFLLPFFYDEEASYIRWNYINQAFNFNRKFLYEWTVNWRFISEEFFLSDTFTNGLLIANASILIFFVFTRFISPKIIGKPISLLIKDGIGRPLTNSVNYNNLLIDPKHGPKLVMLILGSTNVIGILFARSLHYQFLSWYCWQLPFMLYMTGWSLLISFPLWAIHEWCWNVFPSTSLSSGLLISILVIVLFGVWYNTSEWFPSPSVDETVNIDASGESKKDK"
misc_feature 133..1314 /locus_tag="AC631_01322" /note="ALG3 protein; Region: ALG3; pfam05208" /db_xref="CDD:461587" ORIGIN
atgccagaacaagatacaaaggaagttaaaaggccagaattacctcctttcacattgagaaatgtgctaatggatatttataatggtgtattggctttattcactgatccgttctgtactagaatcgtttgtccagtcgtgattgtattgacatcgttattatcgaaggccataatatataatgttccttatacagaaattgacttcaagacatatattcagcaaattcaaataattaacgatggagaacttgattattcgttagtgaagggagacacaggtcaaattgtttatcctgctggatttgtacaaatctatcaagtccttaactggcttaccgaagagggtactgacattcacgcaggtcaaacgttatttggatatttgttggccttaactaactttttggttataatagtctatacaatgactcctaattttcaaccatggccagtttatcttttgcttttgagtaaaagattattctctatttacgtgcttcgattattcaatgattgttttactacagtttgcatgatctccgtgacaattttgttacagcaggcagcatactggtataagaaaggcggaagttcaatcagttttttgttgaccatcgtcgctgctgatttatacagtattgcaatttctataaagatgaatgctttgttgtatctccctggtttcctcatagttgcatatttcttatgtggtgaaaatctattcaagtttggagcagtattgttggtgattccaattgttcaggttcttacgggatggaagttcttgttaccgttcttttatgacgaagaagcttcatacattagatggaactatatcaaccaagcctttaacttcaatagaaagttcttatatgaatggaccgtaaattggagatttatttctgaagaattttttttatcagatacttttactaatgggttattgatagctaacgcttcaatactaatctttttcgtttttacaagatttatttcgcccaagataattgggaaaccaatatctcttcttataaaagatggtataggtagacctttgactaactcagttaattataacaatttgttgatagatccgaagcatggaccaaaacttgttatgttgatactaggatccactaatgtcataggcattttatttgcaagatctttacactatcaatttctttcatggtattgttggcaattaccctttatgctctatatgactggttggagtttgcttatctccttccctctctgggcaatacatgagtggtgttggaatgtatttccatctacatccttaagttcaggcttgttgataagcatcctagttattgtattatttggagtatggtacaatacgagcgaatggttccctagcccgtcagttgacgagactgttaacattgacgcatcaggcgagtctaaaaaggacaaatag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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