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2025-08-20 17:57:20, GGRNA.v2 : RefSeq release 230 (May, 2025)

LOCUS       XM_015610152            1446 bp    mRNA    linear   PLN 20-MAR-2020
DEFINITION  Debaryomyces fabryi Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol
            alpha-1,3-mannosyltransferase (AC631_01322), partial mRNA.
ACCESSION   XM_015610152
VERSION     XM_015610152.1
DBLINK      BioProject: PRJNA309725
            BioSample: SAMN03794732
KEYWORDS    RefSeq.
SOURCE      Debaryomyces fabryi
  ORGANISM  Debaryomyces fabryi
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Debaryomyces.
REFERENCE   1  (bases 1 to 1446)
  AUTHORS   Tafer,H., Sterflinger,K. and Lopandic,K.
  TITLE     Draft Genome of Debaryomyces fabryi CBS 789T, Isolated from a Human
            Interdigital Mycotic Lesion
  JOURNAL   Genome Announc 4 (1), e01580-15 (2016)
   PUBMED   26847909
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1446)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2020) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1446)
  AUTHORS   Tafer,H. and Lopandic,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-NOV-2015) Department for Biotechnology, University of
            Natural Resources and Life Sciences, Vienna, Muthgasse 18, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_015385443).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Debaryomyces fabryi"
                     /mol_type="mRNA"
                     /strain="CBS 789"
                     /culture_collection="CBS:789"
                     /type_material="culture from type material of Debaryomyces
                     fabryi"
                     /db_xref="taxon:58627"
                     /chromosome="Unknown"
                     /geo_loc_name="Germany: Dortmund"
                     /lat_lon="51.5167 N 7.4500 E"
                     /collection_date="1998"
                     /collected_by="C.P. Kurtzman"
     gene            <1..>1446
                     /locus_tag="AC631_01322"
                     /db_xref="GeneID:26838331"
     CDS             1..1446
                     /locus_tag="AC631_01322"
                     /codon_start=1
                     /product="Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol
                     alpha-1,3-mannosyltransferase"
                     /protein_id="XP_015469059.1"
                     /db_xref="GeneID:26838331"
                     /db_xref="GO:0005783"
                     /db_xref="GO:0016021"
                     /db_xref="GO:0016758"
                     /db_xref="InterPro:IPR007873"
                     /db_xref="PFAM:PF05208"
                     /translation="
MPEQDTKEVKRPELPPFTLRNVLMDIYNGVLALFTDPFCTRIVCPVVIVLTSLLSKAIIYNVPYTEIDFKTYIQQIQIINDGELDYSLVKGDTGQIVYPAGFVQIYQVLNWLTEEGTDIHAGQTLFGYLLALTNFLVIIVYTMTPNFQPWPVYLLLLSKRLFSIYVLRLFNDCFTTVCMISVTILLQQAAYWYKKGGSSISFLLTIVAADLYSIAISIKMNALLYLPGFLIVAYFLCGENLFKFGAVLLVIPIVQVLTGWKFLLPFFYDEEASYIRWNYINQAFNFNRKFLYEWTVNWRFISEEFFLSDTFTNGLLIANASILIFFVFTRFISPKIIGKPISLLIKDGIGRPLTNSVNYNNLLIDPKHGPKLVMLILGSTNVIGILFARSLHYQFLSWYCWQLPFMLYMTGWSLLISFPLWAIHEWCWNVFPSTSLSSGLLISILVIVLFGVWYNTSEWFPSPSVDETVNIDASGESKKDK"
     misc_feature    133..1314
                     /locus_tag="AC631_01322"
                     /note="ALG3 protein; Region: ALG3; pfam05208"
                     /db_xref="CDD:461587"
ORIGIN      
atgccagaacaagatacaaaggaagttaaaaggccagaattacctcctttcacattgagaaatgtgctaatggatatttataatggtgtattggctttattcactgatccgttctgtactagaatcgtttgtccagtcgtgattgtattgacatcgttattatcgaaggccataatatataatgttccttatacagaaattgacttcaagacatatattcagcaaattcaaataattaacgatggagaacttgattattcgttagtgaagggagacacaggtcaaattgtttatcctgctggatttgtacaaatctatcaagtccttaactggcttaccgaagagggtactgacattcacgcaggtcaaacgttatttggatatttgttggccttaactaactttttggttataatagtctatacaatgactcctaattttcaaccatggccagtttatcttttgcttttgagtaaaagattattctctatttacgtgcttcgattattcaatgattgttttactacagtttgcatgatctccgtgacaattttgttacagcaggcagcatactggtataagaaaggcggaagttcaatcagttttttgttgaccatcgtcgctgctgatttatacagtattgcaatttctataaagatgaatgctttgttgtatctccctggtttcctcatagttgcatatttcttatgtggtgaaaatctattcaagtttggagcagtattgttggtgattccaattgttcaggttcttacgggatggaagttcttgttaccgttcttttatgacgaagaagcttcatacattagatggaactatatcaaccaagcctttaacttcaatagaaagttcttatatgaatggaccgtaaattggagatttatttctgaagaattttttttatcagatacttttactaatgggttattgatagctaacgcttcaatactaatctttttcgtttttacaagatttatttcgcccaagataattgggaaaccaatatctcttcttataaaagatggtataggtagacctttgactaactcagttaattataacaatttgttgatagatccgaagcatggaccaaaacttgttatgttgatactaggatccactaatgtcataggcattttatttgcaagatctttacactatcaatttctttcatggtattgttggcaattaccctttatgctctatatgactggttggagtttgcttatctccttccctctctgggcaatacatgagtggtgttggaatgtatttccatctacatccttaagttcaggcttgttgataagcatcctagttattgtattatttggagtatggtacaatacgagcgaatggttccctagcccgtcagttgacgagactgttaacattgacgcatcaggcgagtctaaaaaggacaaatag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]