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2024-04-29 16:28:25, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_015225137            1064 bp    mRNA    linear   PLN 28-JAN-2019
DEFINITION  PREDICTED: Solanum pennellii FCS-Like Zinc finger 14-like
            (LOC107024211), mRNA.
ACCESSION   XM_015225137
VERSION     XM_015225137.2
DBLINK      BioProject: PRJNA256426
KEYWORDS    RefSeq.
SOURCE      Solanum pennellii
  ORGANISM  Solanum pennellii
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
            Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_028643.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 28, 2019 this sequence version replaced XM_015225137.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Solanum pennellii Annotation Release
                                           101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Solanum pennellii"
                     /mol_type="mRNA"
                     /db_xref="taxon:28526"
                     /chromosome="7"
                     /note="Tomato Genetics Resource Center (TGRC):accession
                     LA0716"
     gene            1..1064
                     /gene="LOC107024211"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 70 ESTs, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:107024211"
     CDS             305..928
                     /gene="LOC107024211"
                     /codon_start=1
                     /product="FCS-Like Zinc finger 14-like"
                     /protein_id="XP_015080623.1"
                     /db_xref="GeneID:107024211"
                     /translation="
MAERKGNKKRLCINLSLFTLTDNNNSNSNKSPKKFEDPNGAVVGLGIVAAMNKESKNRAAIIAISPRSTTSNPIPIFTSFKKKPSIEEMEMCEEYTCVISHVGTNLVKKREYFDGQFIGNSNFNAYQKTVNHTTSFTMADFLNSCFLCKKQLKGLDIFMYRLEFQLCFLGYCNDYMLTFWDLIFSCRLCFISKYVAALILNRYMLLF"
     misc_feature    719..>787
                     /gene="LOC107024211"
                     /note="zinc-finger of the FCS-type, C2-C2; Region: zf-FLZ;
                     pfam04570"
                     /db_xref="CDD:428015"
ORIGIN      
ctcctcctccattgaaaaaccagagttgtgctcctcttctcagtgagggagaaccaggaaaaaaagtgtagagagagaaacttctgccttttcccctctctctctatttctctttcctttctctctctatatgtatagataactctgtatttagtgaaggattaaaactagacattgagtatagcaaggagatttagcaaaaacaaaaaatccataaagattcagttttttttcctgtttttgagagatttaagagaaccccattaaaatttaatctatttgtctatctgggtgtgggtttaaaatggctgaaaggaaaggaaacaagaagagattgtgtataaatctttccctttttaccctaactgataacaacaacagcaacagcaataaatctcctaaaaagtttgaggacccaaatggtgctgttgttgggcttggaattgtggcagctatgaataaggagagcaaaaatagagctgcaattattgctatatctccaagatcaactacttcaaacccaatcccaatttttactagttttaagaagaagcctagtattgaagaaatggagatgtgtgaggagtatacttgtgttatttctcatgttggtacaaatttggttaagaaaagagagtattttgatggtcaatttataggaaatagcaattttaatgcctaccagaaaactgttaatcatacaacaagttttactatggctgatttcctcaattcttgctttctttgcaagaaacagcttaaggggttggatattttcatgtacaggttagaatttcaactttgttttttaggttattgtaatgattatatgttaactttttgggatctgatatttagctgcagattatgtttcatatctaagtatgttgcagctttaatcttgaatagatatatgcttttgttttgagtaaaatggttgaatgaacttagtcatgctacatattgaatggatttttaggagtaaaatgtttcttcaattgtggaccctgcagaacctttatatatttgataaatgatatgatatcttatcttgtttacttttt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]