2024-04-29 16:28:25, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_015225137 1064 bp mRNA linear PLN 28-JAN-2019 DEFINITION PREDICTED: Solanum pennellii FCS-Like Zinc finger 14-like (LOC107024211), mRNA. ACCESSION XM_015225137 VERSION XM_015225137.2 DBLINK BioProject: PRJNA256426 KEYWORDS RefSeq. SOURCE Solanum pennellii ORGANISM Solanum pennellii Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_028643.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 28, 2019 this sequence version replaced XM_015225137.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Solanum pennellii Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1064 /organism="Solanum pennellii" /mol_type="mRNA" /db_xref="taxon:28526" /chromosome="7" /note="Tomato Genetics Resource Center (TGRC):accession LA0716" gene 1..1064 /gene="LOC107024211" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:107024211" CDS 305..928 /gene="LOC107024211" /codon_start=1 /product="FCS-Like Zinc finger 14-like" /protein_id="XP_015080623.1" /db_xref="GeneID:107024211" /translation="
MAERKGNKKRLCINLSLFTLTDNNNSNSNKSPKKFEDPNGAVVGLGIVAAMNKESKNRAAIIAISPRSTTSNPIPIFTSFKKKPSIEEMEMCEEYTCVISHVGTNLVKKREYFDGQFIGNSNFNAYQKTVNHTTSFTMADFLNSCFLCKKQLKGLDIFMYRLEFQLCFLGYCNDYMLTFWDLIFSCRLCFISKYVAALILNRYMLLF"
misc_feature 719..>787 /gene="LOC107024211" /note="zinc-finger of the FCS-type, C2-C2; Region: zf-FLZ; pfam04570" /db_xref="CDD:428015" ORIGIN
ctcctcctccattgaaaaaccagagttgtgctcctcttctcagtgagggagaaccaggaaaaaaagtgtagagagagaaacttctgccttttcccctctctctctatttctctttcctttctctctctatatgtatagataactctgtatttagtgaaggattaaaactagacattgagtatagcaaggagatttagcaaaaacaaaaaatccataaagattcagttttttttcctgtttttgagagatttaagagaaccccattaaaatttaatctatttgtctatctgggtgtgggtttaaaatggctgaaaggaaaggaaacaagaagagattgtgtataaatctttccctttttaccctaactgataacaacaacagcaacagcaataaatctcctaaaaagtttgaggacccaaatggtgctgttgttgggcttggaattgtggcagctatgaataaggagagcaaaaatagagctgcaattattgctatatctccaagatcaactacttcaaacccaatcccaatttttactagttttaagaagaagcctagtattgaagaaatggagatgtgtgaggagtatacttgtgttatttctcatgttggtacaaatttggttaagaaaagagagtattttgatggtcaatttataggaaatagcaattttaatgcctaccagaaaactgttaatcatacaacaagttttactatggctgatttcctcaattcttgctttctttgcaagaaacagcttaaggggttggatattttcatgtacaggttagaatttcaactttgttttttaggttattgtaatgattatatgttaactttttgggatctgatatttagctgcagattatgtttcatatctaagtatgttgcagctttaatcttgaatagatatatgcttttgttttgagtaaaatggttgaatgaacttagtcatgctacatattgaatggatttttaggagtaaaatgtttcttcaattgtggaccctgcagaacctttatatatttgataaatgatatgatatcttatcttgtttacttttt
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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