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2024-04-27 08:19:39, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_014810675            2180 bp    mRNA    linear   INV 01-DEC-2015
DEFINITION  PREDICTED: Priapulus caudatus uncharacterized LOC106808101
            (LOC106808101), transcript variant X3, mRNA.
ACCESSION   XM_014810675
VERSION     XM_014810675.1
DBLINK      BioProject: PRJNA303167
KEYWORDS    RefSeq.
SOURCE      Priapulus caudatus
  ORGANISM  Priapulus caudatus
            Eukaryota; Metazoa; Ecdysozoa; Scalidophora; Priapulida;
            Priapulimorpha; Priapulimorphida; Priapulidae; Priapulus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_014577314.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Priapulus caudatus Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Priapulus caudatus"
                     /mol_type="mRNA"
                     /isolation_source="mud"
                     /db_xref="taxon:37621"
                     /chromosome="Unknown"
                     /sex="male"
                     /country="Sweden: Gulmarsfjord"
                     /lat_lon="58.270 N 11.453 E"
     gene            1..2180
                     /gene="LOC106808101"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:106808101"
     CDS             238..1668
                     /gene="LOC106808101"
                     /codon_start=1
                     /product="uncharacterized protein LOC106808101 isoform X3"
                     /protein_id="XP_014666161.1"
                     /db_xref="GeneID:106808101"
                     /translation="
MDAAKRESLIKNRDEIVERTQPHLAAILARLLEEGVVGQHIYDIISAKPTPAERAAKLVHILLEKDNRTYDVFASALHNNDLADLARKMAATAFEIETDLPANLHAVELHIEEKTLRILEGKLEGRPHSRGGGDSVIEAALHRGKVPPAAHYLSSPPAEIKDLLQKIVVGIGKLRNRRTPGFTLVYGDVETKSESDLTAAAMHVPELWQTTADGQADFPSDVIWQKIDIVRDDAELFLKTKTILSRLDEKYKHHRQPTCLADAHIALQQVLTNNPHCLLILEDVRSFKVIEHFNVHPRTLVTTHDKQLVDRVKQDLTSALVDLVYVGTSSTTYVPNFRDSVFRRSAGPMDAGGSANNGSFVAHDDSTEEPTFAVQPIETDALRTTPKLRPDANYRLHIAHEIVYVTPAATPNAILYQWRYECIREYSSRPAMFYFKSIDGREERQFRFKTEPGKGKELHEKMRIAARRRMEELSQR"
     misc_feature    262..504
                     /gene="LOC106808101"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; Region: CARD; cd01671"
                     /db_xref="CDD:260018"
     misc_feature    <1414..1641
                     /gene="LOC106808101"
                     /note="Pleckstrin homology-like domain; Region: PH-like;
                     cl17171"
                     /db_xref="CDD:450165"
ORIGIN      
cacgtgttagctgcattactcagatgcccttatattttgatatctcgtcataatttgtttacctgatccggaaatagtcggctatatagagcgtttgaaagcgtgtgtaaccaagggatagcagcgagcgaggaagcgagcagagagcgagcgagagagagagagagagagagaaagagagaaagagagagcgagagagctccagagcgaaagagacataaaccgccgctcagaaacatggatgccgcaaaacgtgaatcactcatcaaaaaccgcgacgagatagtcgagaggacgcagccccacctggcggcgattctcgcgcggctgctggaggaaggcgtcgtagggcaacacatctatgacatcatcagcgccaagccgacgccggccgagcgagcagctaagctcgtgcacatactactcgagaaggacaaccgaacatacgacgtgttcgcgagcgcactgcacaacaacgacctcgcagatctcgctcgcaagatggccgccacggcgttcgaaatcgagacggacctcccggcgaacctccatgccgtcgagttgcacatcgaggagaagacgctgcggatactcgaggggaagctggagggcaggccgcactcgcggggaggaggggactcggtgatcgaagcggcgctgcatcgcggcaaggtgccgccagcggcgcactatctcagcagcccgccggccgagatcaaagacctcctgcagaagatagttgtcggcatcgggaagctgcgtaacagacgcacgccgggattcacgctcgtttacggcgacgtcgagacgaagtccgagtcggacctgacggcggcggcgatgcacgtgcccgagctgtggcagacaaccgccgacgggcaggcggactttccgagtgacgtcatctggcagaagatcgacatagttcgcgacgacgccgagctgtttctgaagacgaagacgattctgtcgagactggatgagaagtacaagcatcacaggcagccgacgtgtctcgcggacgctcacatcgccctccagcaggttctcaccaacaacccgcattgtctgctcattctcgaggacgtcaggtcgttcaaggtcatcgagcatttcaacgtacatccgcgcaccctggtgacgacccacgataaacagctggtcgacagagtcaagcaggatctaacgtcggcgctcgtcgacctggtgtacgtcggcacgagtagcacgacgtacgtgccaaacttccgcgactccgtcttccggcgatcggcgggacctatggacgcgggaggcagcgccaacaacggcagcttcgtagcacacgatgattctactgaggagccgacgtttgcagtacagccgatagagacagacgcactgcggaccacgcccaagctccgacccgacgctaactaccgtctgcacatcgcccacgagattgtctacgtcacacccgcagcgacacccaacgccatcttgtaccaatggcgctacgaatgcatacgagaatacagttccagaccagcgatgttttatttcaaatcgatagatggcagagaagaacgacaattcaggtttaagacggagccggggaaaggaaaggaactgcacgagaagatgcgaattgccgctagacggcgcatggaggaactctcgcaacgataacagtgaaatacggactatgcgcgtgcggcgtatctatgacaaatacgacatacgcatatacgctctcctattgtcataggaagattcttcctatgacaaatattgttgtatgtgtcgtgcgcatcataggagtttaggagcgctattatgaatgcaagcagtgaatttcagctgtaaagcggaacgaagttgactcgccaatatttgtcataggaagaatcttcctatgacaaatagtgtcataggagagcgtatatgcgtatgtcgtatttgtcatagatgcaagcagaacatgttggcgtagcatacctcgacacaggcacctagtcgactacagaaatacatgtcaacgacataacaggaagttttacatattatagagatatatcatatatagcgaataacaccttaaaatattatcatgtatcatatagcaaatgtgttacgtgtacatcagtaatgggttatagatcttcaataaatgttattttatatagaaaatatgaacgtta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]