2025-06-07 05:57:49, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_014692210 2391 bp mRNA linear PLN 26-JUN-2024 DEFINITION Metarhizium brunneum RAD50-interacting protein 1 (RINT1), partial mRNA. ACCESSION XM_014692210 VERSION XM_014692210.1 DBLINK BioProject: PRJNA1128270 BioSample: SAMN15394350 KEYWORDS RefSeq. SOURCE Metarhizium brunneum ORGANISM Metarhizium brunneum Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; Metarhizium. REFERENCE 1 (bases 1 to 2391) AUTHORS Saud,z., Kortsinoglou,A., Kouvelis,V.N. and Butt,T.M. TITLE Telomere length de novo assembly of all 7 chromosomes of the fungus, Metarhizium brunneum, using a novel assembly pipeline JOURNAL Unpublished REFERENCE 2 (bases 1 to 2391) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-JUN-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2391) AUTHORS Saud,z., Kortsinoglou,A., Kouvelis,V.N. and Butt,T.M. TITLE Direct Submission JOURNAL Submitted (09-JUL-2020) Biocontrol and Natural Products Group (BANP), Biological Sciences, Swansea University, Singleton Park Campus, Swansea SA28PP, United Kingdom COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_089423). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2391 /organism="Metarhizium brunneum" /mol_type="mRNA" /strain="4556" /host="Boophilus sp. [Acari: Ixodidae]" /db_xref="taxon:500148" /chromosome="2" /geo_loc_name="USA: Florida" /collection_date="29-Sep-1993" gene <1..>2391 /gene="RINT1" /locus_tag="G6M90_00g043620" /old_locus_tag="MBR_02989" /db_xref="GeneID:26240259" CDS 1..2391 /gene="RINT1" /locus_tag="G6M90_00g043620" /old_locus_tag="MBR_02989" /codon_start=1 /product="RAD50-interacting protein 1" /protein_id="XP_014547696.1" /db_xref="GeneID:26240259" /db_xref="GO:0005783,GO" /db_xref="GO:0048193" /db_xref="InterPro:IPR007528" /db_xref="PFAM:PF04437" /translation="
MSLSHAEASQSLDLRVEDYLDDKLQSIADLDTLDELLVNVETQRNQLQSQLDDAVRELEKARRTTEDRSDSLQQQIDEFNELQASIDTRVKIAAASDAPSEAIARLQRPMKKLQHVELAQKYLILLQDVERLRAEARSYLPDSPKAALEPYAKLKGLALKLRSLSGNEELHLVDHVQAVTESLWNEMKKTMSAELEGVLEKRHWPKVDPHAEMDDEWIACVEKLIDLQMPEITRSSSTLPLLPFNVMTAIFVAEFRFHFMSDKPTSNPQSIGTHCFPWFLTMIEKWEDFFRNNLGHLLATKFHETPVAENTVYLDPVSALITAMLPVMREKVHAVANEAIKNPPFLSSFISQLMTFDENIRQRFSYDDGDDDKGWNGLTGEILDHHFDAWFRVEREFALERFEKIIESADGRKIDYDYSVTGKMKPTFAAVRITDLLRVVTGKYERLRKLKHKTKFLTDIQLDILDGYHDRLRGSLEAYQSITSTLGRTLHGASKEQLAALEGIGALETLCKVIGSSDHIANTLTEWSDEEFFVVLWEDLQTRDAQRSKRNSAASGIAPDSILGRVPSHLSDNGSSDGGIFDETVSAYSSRRKAAEQLLVNALVDSHAKAFRAYASKVQWTTVGDAAVLDDPSQFSITPELDEPLRILQRNFDYLTKALSTASFRRVWHEALDKLQDLLWTSVLLKQSFTTLGAAQFAHDGGAVFSLVERYIPGGSGALDSLREGMQLLNLATAAAADSAEGSAPGLTLKEASDRVFTDNDEARKVLEELGLHVLTPVNARYILQRRVENNENIGW"
misc_feature <16..>285 /gene="RINT1" /locus_tag="G6M90_00g043620" /old_locus_tag="MBR_02989" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" misc_feature 724..2361 /gene="RINT1" /locus_tag="G6M90_00g043620" /old_locus_tag="MBR_02989" /note="RINT-1 / TIP-1 family; Region: RINT1_TIP1; pfam04437" /db_xref="CDD:461309" ORIGIN
atgtcgctttcccatgccgaagcgagtcaatctttagaccttcgtgtcgaggactacctagacgacaagcttcaatcaatagctgatctagacacacttgatgaactgcttgtcaatgtcgaaacgcagcggaaccagctgcagtcccagctcgatgacgctgtcagagagctcgaaaaagctcggcgtaccaccgaggaccggagcgattcgctgcaacagcagatagacgagttcaatgaactgcaggcgagcattgacacccgggtcaagatagccgctgcgtcggatgcgcccagtgaggccattgctcgcctgcagcggcccatgaagaagctccagcacgtcgaattggcgcagaaatatttgatccttctgcaggatgtagaaaggctgcgcgccgaagctcgatcgtacctacctgacagccctaaagccgccctggagccctacgcaaagttgaaaggcctggcactcaaattgaggtccttgtcgggcaatgaggagcttcacctggtcgaccacgtccaggctgtgaccgagagcctgtggaacgagatgaaaaaaacaatgtcggcagagttggaaggcgttttggagaaacggcactggccaaaagtcgatccccatgccgaaatggacgacgagtggattgcctgtgtcgagaaactcatcgacttgcaaatgcctgaaattacccgcagcagcagcactctgcctcttctgccgttcaatgtcatgaccgctatatttgttgctgaattccgattccacttcatgagcgacaaacccaccagtaacccgcagtccattggcacgcactgttttccttggttcctgaccatgattgagaaatgggaggactttttccgcaacaatctaggtcaccttcttgctaccaaattccatgaaacccctgtggccgaaaacactgtgtacctggacccagtgtctgctctcatcaccgctatgctcccagtcatgagggaaaaggttcatgcagttgccaacgaagccatcaagaacccccctttcctgagctcattcatatcgcagctgatgacttttgatgaaaatattcgtcaaaggttcagctatgacgatggtgatgacgacaaggggtggaatggtctgactggggaaatcctggaccaccactttgatgcttggttcagggtggaacgggaattcgcgctcgagagatttgaaaagattatagagtcggccgatggtcgtaaaattgactacgactactctgttacaggcaaaatgaagcccacattcgctgccgttcgcataactgatctcttgagagtggtcactggaaaatacgaacgtttacgcaaattgaaacacaaaaccaagttccttacggatattcagcttgatattctagatggatatcatgatcgtctgcgaggatctctagaagcgtaccaatccattacatcgacactcggccgtacgctccacggtgcctccaaggaacaacttgccgctctggaagggataggtgcattggagacgctgtgcaaggtgattggcagctctgatcatattgccaataccctaacagaatggagtgacgaagagttcttcgtcgtgctatgggaagaccttcagacccgagacgcccagcgaagcaagcgaaacagtgctgccagtggcatcgcaccagacagtatcttgggccgcgtgcctagccacctaagcgacaacggcagcagtgacggcggcatatttgacgagaccgtctccgcgtactcctcacgccgcaaagccgccgagcagcttcttgtcaatgccttggtagactctcacgccaaggcgttccgcgcatacgccagcaaagtccaatggaccactgttggcgacgccgcagtcttggatgacccctctcaattctccatcacgccggaactggacgagcccttgcgcattctacagcgcaactttgattatcttaccaaggccctgtcaacggcttcttttcgtcgcgtgtggcacgaggccctcgacaagctccaggacctcctgtggaccagcgtcctcctcaagcagtcgtttaccacccttggcgccgcgcaatttgctcacgacggaggcgccgtattctcccttgtggagcgctacattcccggtggttcaggggcgttggattcgcttcgcgaggggatgcagctgctgaacttggctacggcggcggccgccgacagcgcagaaggcagcgcacccgggctgacgctgaaagaggctagtgaccgggtattcaccgataacgacgaagcgcgtaaagtattggaagagttggggttgcacgtcttgacgcccgtgaatgcgagatatattctgcaacgaagggtggagaataacgagaatatcgggtggtaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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