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2025-04-02 18:18:32, GGRNA.v2 : RefSeq release 228 (Jan, 2025)

LOCUS       XM_014689283            1041 bp    mRNA    linear   PLN 26-JUN-2024
DEFINITION  Metarhizium brunneum Very-long-chain 3-oxoacyl-CoA reductase
            (MKAR), partial mRNA.
ACCESSION   XM_014689283
VERSION     XM_014689283.1
DBLINK      BioProject: PRJNA1128270
            BioSample: SAMN15394350
KEYWORDS    RefSeq.
SOURCE      Metarhizium brunneum
  ORGANISM  Metarhizium brunneum
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae;
            Metarhizium.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Saud,z., Kortsinoglou,A., Kouvelis,V.N. and Butt,T.M.
  TITLE     Telomere length de novo assembly of all 7 chromosomes of the
            fungus, Metarhizium brunneum, using a novel assembly pipeline
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1041)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1041)
  AUTHORS   Saud,z., Kortsinoglou,A., Kouvelis,V.N. and Butt,T.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2020) Biocontrol and Natural Products Group
            (BANP), Biological Sciences, Swansea University, Singleton Park
            Campus, Swansea SA28PP, United Kingdom
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_089423).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Metarhizium brunneum"
                     /mol_type="mRNA"
                     /strain="4556"
                     /host="Boophilus sp. [Acari: Ixodidae]"
                     /db_xref="taxon:500148"
                     /chromosome="2"
                     /geo_loc_name="USA: Florida"
                     /collection_date="29-Sep-1993"
     gene            <1..>1041
                     /gene="MKAR"
                     /locus_tag="G6M90_00g046430"
                     /old_locus_tag="MBR_04840"
                     /db_xref="GeneID:26242110"
     CDS             1..1041
                     /gene="MKAR"
                     /locus_tag="G6M90_00g046430"
                     /old_locus_tag="MBR_04840"
                     /codon_start=1
                     /product="Very-long-chain 3-oxoacyl-CoA reductase"
                     /protein_id="XP_014544769.1"
                     /db_xref="GeneID:26242110"
                     /db_xref="GO:0005783,GO"
                     /db_xref="GO:0016491,GO"
                     /db_xref="GO:0030497,GO"
                     /db_xref="GO:0045703"
                     /db_xref="InterPro:IPR002347"
                     /db_xref="PFAM:PF00106"
                     /translation="
MDKILENPYVAGIKSHVEQLGPIPQPVLGAFAGVGALWLTYKLFGYLQLVLSAFVFSGHNLRKYGRAGSWAVVTGASDGLGKEYASQLAAKGFNLVLVSRTKSKLESLAKELQEKYHGKDLDIKIHAMDFAKDDDADYEKLAEVVRGLDVAILINNVGQSHSMPVSFLETPKDELQNIVTINCLGTLKVTQIVAPILKQRKHGLILTMGSFGGWTPTPYLATYSGSKAFLQQWSNALSSELADDHVDVYLVLSHLVTTAMSKVRRPSLLIPNARNFVKAALGKIGLGGYQTAPNTYTPWWSHSFMLWLIENVPGVNSPVTIWYNKKMHLDIRRRALRKQAREAKKQ"
     misc_feature    202..939
                     /gene="MKAR"
                     /locus_tag="G6M90_00g046430"
                     /old_locus_tag="MBR_04840"
                     /note="17-beta-hydroxysteroid dehydrogenases (17beta-HSDs)
                     types -1, -3, and -12, -like, classical (c) SDRs; Region:
                     17beta-HSD1_like_SDR_c; cd05356"
                     /db_xref="CDD:187614"
     misc_feature    order(223..225,229..240,295..303,379..387,466..474,
                     541..543,622..630,667..669,679..681,757..768,772..777)
                     /gene="MKAR"
                     /locus_tag="G6M90_00g046430"
                     /note="putative NAD(P) binding site [chemical binding];
                     other site"
                     /db_xref="CDD:187614"
     misc_feature    order(544..546,628..630,667..669,679..681)
                     /gene="MKAR"
                     /locus_tag="G6M90_00g046430"
                     /note="active site"
                     /db_xref="CDD:187614"
ORIGIN      
atggataagattttggagaatccctacgtggcaggcatcaagtcgcacgtcgagcagcttggcccgattccccagcctgtgctaggtgcctttgctggcgttggtgcactttggctcacatacaagctctttggctatctccagctcgtcctgagtgcattcgtcttctccggtcacaatcttcgcaagtatggccgcgccggatcatgggccgtcgtaactggtgcctcagatggtcttggtaaggagtatgcctcccaactcgctgccaagggcttcaatctcgtcctcgtttcccgaaccaaatccaagctcgagtcgctcgccaaggagctgcaagagaaataccatggcaaggaccttgatatcaagattcacgccatggacttcgccaaggacgacgatgccgattatgagaagctcgccgaggtcgttcgtggcctcgacgttgctatcctgataaacaatgtcgggcagagccacagcatgcccgtctctttcctggagacacccaaggacgagctgcagaacattgttacaatcaattgcctgggtactctcaaggtcactcagattgttgcccctattctcaagcagcgcaagcatgggttgatattgaccatgggctccttcggtggctggacacctactccttacctggctacctactctggcagcaaggccttcctgcagcaatggagcaatgctctttcgtctgaacttgctgatgaccacgtggacgtgtatctggttctcagccacctagttactactgccatgagcaaggtccgccgccctagcctcctgattcccaatgcccgtaattttgtcaaggctgctctcggcaaaattggccttggtggttatcagactgcccccaacacttacactccttggtggagccactctttcatgctgtggttgattgagaacgttcccggcgtcaacagccctgtcactatctggtacaacaagaaaatgcacttggatattcggagacgggccctccgcaagcaggcgcgcgaggctaagaagcagtag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]