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2024-04-23 23:57:25, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_014498898             939 bp    mRNA    linear   VRT 26-OCT-2015
DEFINITION  PREDICTED: Latimeria chalumnae uncharacterized LOC106707086
            (LOC106707086), mRNA.
ACCESSION   XM_014498898
VERSION     XM_014498898.1
DBLINK      BioProject: PRJNA219830
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Latimeria chalumnae (coelacanth)
  ORGANISM  Latimeria chalumnae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Coelacanthiformes; Coelacanthidae; Latimeria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_005822710.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Latimeria chalumnae Annotation
                                           Release 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Latimeria chalumnae"
                     /mol_type="mRNA"
                     /isolate="SAIAB 97564"
                     /db_xref="taxon:7897"
                     /chromosome="Unknown"
                     /tissue_type="blood"
                     /country="South Africa"
                     /note="Wild Caught"
     gene            1..939
                     /gene="LOC106707086"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 56% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:106707086"
     CDS             1..939
                     /gene="LOC106707086"
                     /codon_start=1
                     /product="uncharacterized protein LOC106707086"
                     /protein_id="XP_014354384.1"
                     /db_xref="GeneID:106707086"
                     /translation="
MSGNSGHPKIETDGGAGGELSVRDEDTEQRLPKPNTVTQDCKATLYTEVMKKNVRNNMNHCPPVTPVYENVDQFQSTKNVEGLMSPENTHAGKKVSSLSDILLLGISQSQIPRLPTEQAIFQPWGCGPGQGNCSDQKVLLCNLIPAGLKPQDLRSSEEEEEEEPDYCNLDPNESGNGIPPPVPQKTHDEKQGRRPWPSPTPPEGSVRKTPCLYEEEREEEPDYCNMIETDGLLQSHDPTGHLPTITAFEKFNSTQTVYSTPHSLRTLESEMPGGDGGRHPGQLPHAFCPAKKFRNGVCMKPIPQPQEDEWTD"
ORIGIN      
atgtcgggtaactctgggcaccccaagattgaaactgatggaggggctggaggcgagctgtccgtgagggatgaggacacggagcaaagactccccaaaccaaacactgtaacgcaagactgcaaagccactctttatactgaagtaatgaaaaaaaatgtgcgcaacaacatgaaccactgcccaccagttacaccagtttatgagaatgtggaccagtttcagagcaccaagaacgtggagggcctgatgagtccggagaacacccatgccgggaagaaagtcagctcactctccgatatcctcctcttaggaatctctcagtctcagattccgagactccccacggaacaggccattttccaaccctggggctgtggcccaggacagggtaactgcagtgatcagaaggttttactgtgtaacctcatcccggcggggctgaagcctcaggacttgcggagctcagaggaggaagaggaggaggaaccagattattgcaacttggaccccaatgagtctgggaatggcattccccctccagtacctcagaaaacacacgacgagaaacaagggaggagaccctggccttcccccactccccccgagggctctgtgaggaagactccctgcctgtatgaagaagaaagagaagaggagcctgattattgcaatatgatagaaacagatggcttgttgcagtcacatgacccaacgggacaccttccaacgataacagcctttgaaaagttcaacagtacgcaaacagtctattccacgcctcacagtctccggacgctggagtccgaaatgccaggaggtgacggggggcgccaccctggacagctcccgcacgccttctgccccgccaagaaattccgcaatggagtgtgcatgaagcccatcccccagccccaagaggatgaatggacagactag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]