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2024-04-29 15:16:52, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_014429273            1107 bp    mRNA    linear   INV 26-MAR-2018
DEFINITION  PREDICTED: Halyomorpha halys mitochondrial fission 1 protein
            (LOC106686126), mRNA.
ACCESSION   XM_014429273
VERSION     XM_014429273.2
DBLINK      BioProject: PRJNA298780
KEYWORDS    RefSeq.
SOURCE      Halyomorpha halys (brown marmorated stink bug)
  ORGANISM  Halyomorpha halys
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera;
            Panheteroptera; Pentatomomorpha; Pentatomoidea; Pentatomidae;
            Pentatominae; Halyomorpha.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_020110419.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Mar 26, 2018 this sequence version replaced XM_014429273.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Halyomorpha halys Annotation Release
                                           101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Halyomorpha halys"
                     /mol_type="mRNA"
                     /isolate="HHAL.00"
                     /db_xref="taxon:286706"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="whole organism"
                     /note="undomesticated insect"
     gene            1..1107
                     /gene="LOC106686126"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 8 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 6 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:106686126"
     CDS             274..723
                     /gene="LOC106686126"
                     /codon_start=1
                     /product="mitochondrial fission 1 protein"
                     /protein_id="XP_014284759.1"
                     /db_xref="GeneID:106686126"
                     /translation="
MDEILDEVGSPEELKKFEAIYNQQLEEQSVTTDATFNYAWSLVRSRYAADIRKGICLLETIFNEDREQTRRDCVYYLAIGYAKLKEYNKALQYTKAFLNLEPANLQVQSLDSTIRKRMEKEGLIGMALAGGAVLALGGLVTLGLALSKK"
     misc_feature    301..642
                     /gene="LOC106686126"
                     /note="Mitochondrial Fission Protein Fis1, cytosolic
                     domain; Region: Fis1; cd12212"
                     /db_xref="CDD:276936"
     misc_feature    order(310..312,319..324,331..333,367..375,379..384,
                     391..393,418..420,427..432,436..441,448..450,457..462,
                     466..468,475..477,481..489,493..495,499..501,523..525,
                     529..531,538..540,547..552,559..561)
                     /gene="LOC106686126"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:276936"
     misc_feature    367..465
                     /gene="LOC106686126"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276936"
     misc_feature    475..573
                     /gene="LOC106686126"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276936"
ORIGIN      
ctattttttatttagtagtcatttaactgtatatcatcacttagttttaatttaatgaaatagattaatatcattaagccataaagaataacataaccgtctgatagttgactttgagccaaagcccataaattcaacctagcagcacgaacagctgtttttgttgggactcggggaggcagcgctatctcaagtgattagttcaaccttctgtcatagttgattagtgttcgtcagtcctttaattgtcatgctgtaagaatacaattcggaatggacgaaatcttagatgaagtgggttccccagaagaacttaagaaatttgaagcgatatacaaccaacaattagaagaacaatcggttactaccgatgcaacttttaattatgcttggagcttagttcgtagtcgttatgcagctgacataagaaaaggcatatgtctattagaaactattttcaatgaagatagagagcaaacaagaagagattgtgtttattacttagccataggctatgccaaattaaaggagtataataaagcactgcaatataccaaagcttttttaaatttagaaccagcaaacctccaggtgcaaagtttagatagtaccattaggaaaagaatggagaaagagggtctgattggtatggcactggctggaggagctgttttagcgcttggaggtcttgttacattgggattagctttatcgaaaaaataacttttaattcttaccatgttgtttttgttttgtttaaaaacagcatggtaatttaaataaataaatacaccttcgcattttttattttattatttttattttacatggttgtgttagatgtgatatttaaggaagtcattttagttcataaattattttaataatttagaatatataaattattgttctttaattataactatttaaaaaaataatataaaaaattttcaacctttttttttgttatgctttatttatgtttagcacaaaatattatatctcattccaatttcttggggcatctgttgatacattagaaaagtaagtcaggatgtattatattaaaaaaaataaagttgaaaaataataatacacacatttgaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]