2024-04-19 15:02:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_014297730 1407 bp mRNA linear PLN 22-SEP-2015 DEFINITION Sphaeroforma arctica JP610 hypothetical protein mRNA. ACCESSION XM_014297730 VERSION XM_014297730.1 DBLINK BioProject: PRJNA295933 BioSample: SAMN02953786 KEYWORDS RefSeq. SOURCE Sphaeroforma arctica JP610 ORGANISM Sphaeroforma arctica JP610 Eukaryota; Ichthyosporea; Ichthyophonida; Sphaeroforma. REFERENCE 1 (bases 1 to 1407) AUTHORS Russ,C., Cuomo,C., Young,S.K., Zeng,Q., Gargeya,S., Alvarado,L., Berlin,A., Chapman,S.B., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Howarth,C., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yandava,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N., Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Haas,B., Nusbaum,C. and Birren,B. CONSRTM The Broad Institute Genome Sequencing Platform TITLE The Genome Sequence of Sphaeroforma arctica JP610 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1407) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (21-SEP-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1407) AUTHORS Russ,C., Cuomo,C., Young,S.K., Zeng,Q., Gargeya,S., Alvarado,L., Berlin,A., Chapman,S.B., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Howarth,C., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yandava,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N., Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Haas,B., Nusbaum,C. and Birren,B. CONSRTM The Broad Institute Genome Sequencing Platform TITLE Direct Submission JOURNAL Submitted (23-FEB-2011) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_014039826). FEATURES Location/Qualifiers source 1..1407 /organism="Sphaeroforma arctica JP610" /mol_type="mRNA" /strain="JP610" /db_xref="taxon:667725" /chromosome="Unknown" gene 1..1407 /locus_tag="SARC_08298" /db_xref="GeneID:25908802" CDS 236..814 /locus_tag="SARC_08298" /codon_start=1 /product="hypothetical protein" /protein_id="XP_014153205.1" /db_xref="GeneID:25908802" /translation="
MEEGYRDPCPYRIIDDFGGAFAMGAIGGALWHAGKGFKNAPPGIRFRSSLSAIKARAPVMGGNFAAWGGMFSTFDCTLVYLRQKEDPWNAIASGALTGGVLAARGGLSVASRSAFFGGVMLALIEGLSIAINHGIASSSRPQLDHVPDAPIPPPMTMAAPPPQRSQAANDYGQNMGGFSGAPAQHDEELLTT"
misc_feature 251..670 /locus_tag="SARC_08298" /note="Tim17/Tim22/Tim23/Pmp24 family; Region: Tim17; cl02381" /db_xref="CDD:445766" ORIGIN
aattcgtcgaatatatgactgaaccccttttcctgcttggataggcatgcatttatttgaaagacatatatttacacgacttccacatagtcagggcacatatacgcatagcgaccctataccccacacatatatacatacatatatatatatatatatgtaatatatatataaatacatatccttaattatacacatacatagtatttgtacataaacaacacacaaatatacaatggaggaaggataccgtgacccctgtccctaccgaatcatcgatgatttcggtggagctttcgccatgggcgctattggtggagctctgtggcatgcgggtaaggggttcaagaacgcacctcccggcatacgcttcagaagcagtctgtcggccatcaaagccagagctccagtgatgggtggcaattttgctgcgtggggaggcatgttctcaaccttcgactgcacactcgtatatctcagacagaaggaagacccctggaacgccattgccagtggagctctgacaggtggcgtgttagccgcccggggtggactctccgtggccagtcgatcggcgttcttcggtggtgtgatgctggcgctcattgagggtctgagtatagctattaaccacggcattgcatcgtcctcccgtccccaactggaccacgtgcccgatgcacccatccccccgcccatgactatggccgcgccccctccccagcggagtcaggccgcgaacgactacggtcagaatatgggtggcttcagcggagcccccgcccagcacgacgaagagctgttaacgacgtagatgatataaataacttgtaaataattgtatatctaattgtgtatataccccggtgggagtgtcaatgtgacacgacacagcatattcgatactccctgtgttaaacgaaacgactagtatatggtggtgtcaaggcacaacgcgctccacccgtgatacgttcatatacaaggcacatgtattatacttgcgtgcaggtacatgtatgtgagtgtacacgcaagtacatgcatgtgagtgtacgtgccaggcgattcaaagcttgttagaagatgtcgcgaatggaggagggctcgattcccggcggcttgagcgggtatctcggttgagctacccggtaggcttcgtgtacatagagactgcgtgctaagattagttcacaaatttaggcggtaatcatctcgcgagcgtggttacgtgtggggattggtactgcaacaagcatgcacttcatctgtgtatacggacacatacattgcgtgtgtgtgcgtgtgcgtgtgcatatgcacatgtagatatgtatatcggttgtagagcagttgtgcaagtatatctaataaaactgaaatgctgcagaagcggctcatctttgg
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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